Contarinia nasturtii (swede midge): 116339143
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Entry
116339143 CDS
T08003
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
116339143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116339143
03012 Translation factors [BR:
cns03012
]
116339143
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116339143
mRNA cycle factors
Stress granule specific factors
116339143
Translation factors [BR:
cns03012
]
Eukaryotic type
Initiation factors
eIF-4
116339143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Collagen
Motif
Other DBs
NCBI-GeneID:
116339143
NCBI-ProteinID:
XP_031620699
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MAMSGKKGKKAKGKTLNLQDFLSENGGATSGSIVTKSLSWANECEDDDYAPPKIITYSIP
TAPRSQRVLDDSTIPTNPPFLAHISNLSYDLNETDIQEYFEQVTNFEVVSVRLPREDGDT
GRMRGFGYIEFAEREGLIEAVSQPDLQLRNRKIRIDVSNEQEKNRSSGNRGRYDNFGSSS
ENRDTNWRGRNQDNGQDTGRRNPIENGGNWRSDRPKMDSPPPPRRGDRGDRGDRGDRGDR
GDRGDRGDRGDRGDRGDRGDRYGGRRNEERPLLEERPRLKLQPRTLPMPEFNLQIDEREA
AETEKEKEKAERPKPTPVPSAAIFGSAKPVDTAAKDREIEERLERERVERIEREKREKQE
KLDAEAAAATAAAEAPADADDNADDNTTAVNTDAEVNDEATDTGAANQDSTDPDVEPNGL
ESSDEKKSADKPEIISWRRKPEDDDRRPSSPSRKRYSPDRRRRQNDDRDRRNNRDRDNNR
STNYNRDKRDYNRDYHQRSDRNDRNQPRNQSRNYNNRGPRDERDNRDNRDNRDNRDSRDN
RDSRDNRDSRDNRDTRDNREKPRRALNPDEIENRMPKFKPENKPKLQMSNAYEIFNDETS
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcaggcaagaaaggaaaaaaggcaaagggaaaaaccctcaatttacaagat
ttcttaagtgaaaatggcggtgccacatctggatccatagtgaccaaaagtttatcatgg
gcaaatgaatgtgaagacgatgattatgcacctccaaaaatcataacttattccataccg
accgcaccacgatcgcaacgagtacttgatgacagtacgattccaacaaatccaccattt
ttggcgcatatttcaaatttatcttatgacctgaacgaaactgatatacaggaatacttt
gaacaagtaacaaattttgaggtggtatcggtgcggctaccccgtgaagatggcgacacc
ggacgaatgcgtggcttcggttatattgaatttgccgaacgtgagggattgattgaagcg
gtcagtcaaccggatttacaattgagaaatcgtaaaattcgcattgacgtatcaaatgaa
caagagaaaaaccggtcgagcggtaatcgtggacgttatgataatttcggttcatcatcg
gaaaatcgtgacaccaattggcgtggtcgtaatcaagacaatggacaagatactggacgt
cgtaatccaatagaaaatggtggcaattggcgttcagatcgtccaaaaatggactcacca
ccgccgccacgtcgtggagacagaggcgatcgtggagacagaggcgatcgtggagacaga
ggcgatcgtggagacagaggcgatcgtggagatcgcggagatcgtggcgatcgaggtgac
cgatatggtggacgccgaaatgaggaaagaccattgctcgaagagagaccacgactaaaa
ttgcaaccacgcactttaccgatgccagaattcaatttacaaatcgacgaacgtgaagcg
gccgaaacagaaaaggaaaaagaaaaagccgaacgaccaaaaccaacacccgtaccatcg
gcggcaatttttggcagtgccaagccagttgatacggccgccaaggatcgtgaaatcgaa
gaacgattggaaagagaacgagtggagagaatagaacgtgaaaaacgtgaaaaacaagag
aaattagatgctgaagctgctgctgcaactgccgctgccgaagctcccgctgatgctgat
gacaatgctgatgacaataccactgctgtcaacactgacgcagaggtcaacgatgaggca
actgataccggtgctgctaatcaagactctactgatcctgatgttgaaccaaatggactg
gaaagtagcgacgaaaagaaatcggctgataaaccagaaattattagttggcgcagaaaa
cctgaagatgacgatagaagaccatcatcaccttcacgtaagagatacagccctgatcgt
agaagaaggcaaaatgatgatcgagatcgccgtaataatcgggatcgtgataataacaga
agtactaattataatcgcgataagcgggactacaatcgtgattaccatcaaagaagtgac
agaaatgatagaaatcaacccagaaaccagtcaagaaattataataaccgagggccacgc
gatgaaagagataatcgagataatcgagataatcgggacaatcgggacagtcgggacaat
cgagacagtcgggacaatcgagacagtcgggacaatcgagacactcgggacaatcgagag
aagccaagacgtgcgttgaatccagatgaaattgaaaatcgaatgcccaaattcaaacca
gaaaataaacctaaattgcaaatgtctaacgcatatgaaattttcaacgacgaaacttct
gaataa
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