Contarinia nasturtii (swede midge): 116343191
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Entry
116343191 CDS
T08003
Name
(RefSeq) WD repeat-containing protein 61
KO
K12602
WD repeat-containing protein 61
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116343191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116343191
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
116343191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
RMC1_N
Nup160
WD40_like
Cytochrom_D1
WDR54
PROPPIN
PQQ_2
Motif
Other DBs
NCBI-GeneID:
116343191
NCBI-ProteinID:
XP_031626983
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MYSLSHKEEYAHEESIWCVAWGRTKEEKSDSEMKDVDDEDSQERKNDGELNDFIVTGSLD
DTVKIWDVKDKRLRFQKELAGHSLGVVSVAVSGDGKTIASSSLDSGLFIWKTETGQKLNT
TELGPVDLWTVAFSPDDKYVISGSHEGKITLYSVETGKPEQVLDPQNGKFTLSIAYSPDG
KYIASGAIDGIINIFDVAAGKVALSLEGHAMSVRSLCFSPDSQMLLTASDDGHMKLYDVA
HSDIAGTLSGHASWVLSVSFSEDGKHFTSSSSDKTVKIWDVAERKCMHTFNEHLDQVWGV
KYSPDNNKVVSVSEDRSINLYDCPANIKQSQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgttgtcgcataaagaggaatatgctcacgaagagagtatttggtgtgtggca
tggggtcgtaccaaagaagaaaaatccgattcggaaatgaaagatgtcgacgacgaagat
tcacaagagcgaaaaaatgatggtgaattgaacgattttattgtaactggttcgttggat
gacacagtcaaaatatgggatgtcaaagacaaacggttgcgatttcaaaaagaattggcc
ggacattcgttgggtgttgtttcggttgccgtgagcggcgatggaaaaacaatcgcaagt
agttcacttgattcgggtctattcatttggaaaacggaaaccggacaaaagttgaataca
accgaacttggaccggttgatttatggacggtagcgttctcacccgatgataagtatgtt
atctctggctcacacgagggtaaaataacattgtattccgtggaaacaggcaaacccgaa
caagttttggatccacaaaacggcaaatttaccttaagcatagcatatagcccggatgga
aagtacatcgctagtggcgcaatcgatggaattatcaatatttttgatgtggccgctgga
aaagttgctctatcgctcgaaggtcacgccatgtcggtgcgaagtttatgcttttcaccc
gattcacagatgcttttgactgcctccgacgatggacacatgaaactttatgatgtcgcg
cattcagatatagccggtactctatcgggacatgcatcttgggtattaagcgtgtctttc
tctgaagatggcaagcactttacgtcatcgtccagtgataaaacggtgaagatttgggat
gttgccgaacgaaaatgtatgcacacattcaatgagcatttggatcaagtatggggcgta
aaatacagtccggacaacaacaaagtggtctcagtctctgaagatcgaagcattaactta
tacgattgcccagcaaatatcaaacaatcccaataa
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