Cobetia sp. AM6: CLAM6_19600
Help
Entry
CLAM6_19600 CDS
T08724
Symbol
gabD_2
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00250
Alanine, aspartate and glutamate metabolism
cobe00310
Lysine degradation
cobe00350
Tyrosine metabolism
cobe00650
Butanoate metabolism
cobe00760
Nicotinate and nicotinamide metabolism
cobe01100
Metabolic pathways
cobe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CLAM6_19600 (gabD_2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CLAM6_19600 (gabD_2)
00310 Lysine degradation
CLAM6_19600 (gabD_2)
00350 Tyrosine metabolism
CLAM6_19600 (gabD_2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CLAM6_19600 (gabD_2)
Enzymes [BR:
cobe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CLAM6_19600 (gabD_2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CLAM6_19600 (gabD_2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CLAM6_19600 (gabD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Apolipoprotein
Semialdhyde_dh
RolB_RolC
Motif
Other DBs
NCBI-ProteinID:
BBO56649
UniProt:
A0A5K7Y9Y7
LinkDB
All DBs
Position
2334083..2335465
Genome browser
AA seq
460 aa
AA seq
DB search
MSNKTLTASNPANDKVLKEYATLSKEEVQQKLEQTRKAYSSFSQTTVQDRAQRLTVLADL
IDEHQKEIATQIAHEMGKPYDQGISETQISSSIARFYADNLPKLMETEQRDVDGAVRAKI
VKDPIGAVLGVMPWNYPLYQVIRFAAPALAGGNVCLMKHASNVPGCADLITQLFHKADFE
EGIFTWLPVGSEMIEDIINDPVVQGVTLTGSEEAGRKVAEQTGAALKPSVLELGGIDPLI
VLDDADIERAVDLAIAGRFDNTGQSCAASKRLIVDKSLAEDFSKRLIEKVKDMRMDDPMS
EGVDIGPMSRKDLRDDLHDQVQRAIKAGAKLECGGEIPDRDGAWYPPTVLTNVTQGNPAF
NEELFGPVASVVVADNEAHAIELANDCPYGLGSTVVAKDDERGERVSRQLQAGMSFVNRP
TTPFAQLPFGGVKGSGYGREQSEYGFGAFMNIRTVYVAEH
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagacactgaccgcatccaacccggccaatgacaaggttctcaaggaatac
gccacgctgagcaaggaagaggttcagcagaaactggagcagacgcgtaaggcgtactcg
agcttcagccagaccaccgtgcaggatcgtgcgcagcgcctcaccgttctggcggacctg
atcgatgagcatcagaaggaaatcgccacgcagatcgcccatgagatgggcaagccctat
gatcagggcatcagcgagacgcagatttcctccagcatcgcgcgcttctatgccgacaat
ctgcccaagctgatggaaaccgagcagcgtgatgtcgatggtgccgtgcgtgccaagatc
gtcaaggaccccatcggcgccgtcctcggcgtgatgccgtggaactatccgctctatcag
gtaatccgtttcgcggctccggccctggcgggcggcaatgtctgcctgatgaagcacgcc
tccaatgtcccgggctgcgccgatctgatcacccagctgttccacaaggccgactttgaa
gagggtatcttcacctggttgccggtgggttcggagatgatcgaagacatcatcaatgac
cctgtcgtgcagggcgtcaccctgaccggcagtgaagaggcaggtcgcaaggtcgccgag
cagacaggcgcggcgctcaagccaagcgtgctggagctgggcggtatcgatccgctgatc
gtgctggatgatgccgacatcgagcgtgcggtggatctcgccatcgccgggcgtttcgac
aacacaggccagagctgcgccgcgtccaagcgcctgatcgtcgacaagtccctcgccgag
gacttctccaagcgtctaatcgagaaggtcaaggacatgcgcatggacgacccgatgagc
gaaggggtcgatatcggcccgatgtctcgcaaggacctgcgcgatgacctgcatgaccag
gtccagcgcgccatcaaggcaggcgccaagcttgagtgcggtggtgagattccggatcgc
gacggtgcttggtatccgccgaccgtgctgaccaatgtcacccaaggcaatccggccttc
aatgaagaactgttcggtccggtcgcttcagtggtggttgcggacaacgaagcgcatgcc
atcgagcttgccaacgactgcccctatggcctgggcagcaccgtggtggccaaagacgac
gaacggggtgaacgcgtctctcgtcagctgcaggccggcatgagcttcgtcaatcgcccg
accacgcccttcgcccagctgcccttcggtggcgtcaaaggcagtggctatggtcgtgag
cagagcgaatatggcttcggtgccttcatgaatatccgcaccgtctatgtcgctgagcac
tga
DBGET
integrated database retrieval system
