Cobetia sp. AM6: CLAM6_33680
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Entry
CLAM6_33680 CDS
T08724
Symbol
birA
Name
(GenBank) bifunctional ligase/repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00780
Biotin metabolism
cobe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
CLAM6_33680 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_33680 (birA)
Enzymes [BR:
cobe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
CLAM6_33680 (birA)
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
Other families
CLAM6_33680 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
HTH_24
HTH_AsnC-type
BPL_C
HTH_1
HTH_50
MarR_2
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BBO58057
UniProt:
A0A5K7YB10
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All DBs
Position
complement(4058892..4059872)
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AA seq
326 aa
AA seq
DB search
MTIRDLIRLLGDGGYHSGEALGEELGVSRTAVWKQLKKLEALDIPLEAIKGLGYRLANPI
ELLDGQQIIEALPRETRKHLTRLFVEESVDSTNTFIRERFRQGAGHAEVCLAEVQSAGRG
RRGREWETPWGRSLVFSLGWRFESGAASLEGLSLAIGVAVAEVLEADGLPARLKWPNDVL
LQIQKDQPKIAGILVEVTGDVSGPCDVVIGIGMNIELPASRREAITQPVAAVRDIIPGAS
RNRYAARLMESLLALLPEFESQGFAGWQARWNERNAFKGRDVVILRGDRREEAVAEGVDI
NGNLEVRMNGETITLAGGEISLRAVS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgtgatctcattcgtctgcttggagatggtggctaccactccggagaggcc
ctgggcgaagagctcggggtgtcgcgtacggcggtctggaagcagctcaagaaacttgag
gcgctcgacattccgctggaagccatcaaggggcttggctatcgactggccaaccccatc
gagttgctcgatggtcaacagatcatcgaggcgctgccgcgcgagactcgcaaacacctg
acgcgcctgttcgtcgaggagtcggtggactcgaccaataccttcatccgcgagcgcttt
cgtcagggagccggccatgccgaggtctgtctggcggaggtgcagtcggctgggcgtggc
cgtcgtgggcgtgagtgggagactccctggggccgcagcctggtcttctcgcttggctgg
cgcttcgaatcaggcgccgcatcgcttgagggcctgagtctggcgatcggcgtggcggtg
gcggaggtgctcgaggccgatggcctgcccgcgcgcctcaagtggcccaacgatgtcctg
ctgcagatacagaaggatcaacccaagatcgccggcatcctggtcgaggtcacaggtgat
gtgtccggtccctgtgatgtcgtcatcggtatcggcatgaacatcgagttgccggcctcc
cgacgcgaggcgatcactcaaccggtggctgcggtacgtgacatcattcccggtgcttca
cgcaatcgctatgccgcgcgtctgatggagtcattgctggcactgttgcccgagttcgag
tcgcagggctttgccggatggcaggcgcgttggaatgagcgcaatgctttcaaggggcgt
gatgtggtgattctgcgcggagacaggcgagaagaggccgtggcagaaggtgtcgatatc
aatggaaatctcgaggtgcgcatgaatggcgaaaccatcactctcgccggtggcgagatc
agtctgcgcgccgtctcatga
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