Capnocytophaga ochracea: Coch_0034
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Entry
Coch_0034 CDS
T00961
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc00470
D-Amino acid metabolism
coc01100
Metabolic pathways
coc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Coch_0034
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Coch_0034
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
coc01011
]
Coch_0034
Enzymes [BR:
coc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Coch_0034
Peptidoglycan biosynthesis and degradation proteins [BR:
coc01011
]
Precursor biosynthesis
Racemase
Coch_0034
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ACU91600
UniProt:
C7M4H0
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All DBs
Position
complement(49880..50989)
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AA seq
369 aa
AA seq
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MKTEETVLEINLTALEKNVLYLKSRLKPTTLFLGVVKASSYGNNSVPIALHLQKKGLANY
FAVAYTSEGKALREAGITLPILVLHPQPINFDDIVKYKLEPTLYSQRITKLFLEYAEKHH
LVKYPVHLKCNTGLNRLGFDLNEIDEVLALLKNNTTVTVKTAYSHLAASEDMNEKEFTEN
QIKTFIAFQEKINKTFSHKVIYHQCNTSGILNYAHAQFDMVRCGIGMYGFANDAQLQQYL
TPIMTLKSVISQIHTLQVGDSLGYNRGYIADHITKTATIPVGHADGINRIYGKGKGFVFI
NGKKAPIIGNVCMDMILVDVTNIPCEEGGEVIVFDKDHTAETLAESAGTISYELITSMAH
RIKRVYIEE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagaagaaaccgttttagaaattaaccttaccgccttagaaaaaaacgttctt
tacttaaaaagccgactcaaacctacaactttgtttttgggagtggtaaaagcttcctct
tatgggaataattcggtgcctatagctttacatttgcaaaagaaaggattggcgaattac
tttgcagttgcctacacttccgaaggtaaagctttgagagaagcaggtattacacttcct
atattggtgttacacccacaacctattaattttgatgatattgtaaaatataaattagaa
ccgacattatattcacagcgtattacaaagttattcttggagtatgctgagaaacaccat
ttggtaaaatatcctgtgcaccttaaatgtaacacagggcttaatcgcttggggtttgat
ttaaatgaaatagatgaagtgctcgctttgttaaaaaataatactacggtgacagtgaaa
acggcttattctcatttagcggcttcagaggatatgaatgagaaagagtttactgaaaat
cagattaagacttttattgctttccaagaaaagataaacaaaactttctctcataaagta
atttaccaccagtgtaatacttcaggtatactgaattatgcccacgctcagtttgatatg
gtgcgttgtggtataggaatgtacggctttgccaatgacgctcagctacaacaatatctt
acgcctattatgactctcaaaagcgttatctcacaaatacacactttgcaagtaggtgat
agtttaggctataatcgcggttacattgctgaccatattactaaaacagctactataccg
gtaggtcacgctgatggaatcaaccgtatttacggtaaggggaaaggctttgtatttatc
aatgggaagaaggcgcctattataggtaatgtgtgtatggatatgatattggtagacgtt
actaatattccttgtgaagagggaggagaggtaattgtatttgataaagaccatacagct
gagacattagctgaatcggcagggacaatttcttatgaacttattacctctatggcgcac
agaatcaagagagtatatatagaagagtga
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