Comamonas odontotermitis: LAD35_01735
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Entry
LAD35_01735 CDS
T07833
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
codo
Comamonas odontotermitis
Pathway
codo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAD35_01735 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_01735 (xth)
Enzymes [BR:
codo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LAD35_01735 (xth)
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LAD35_01735 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UBB18969
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All DBs
Position
complement(399872..400675)
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AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGIRSAATKGVIPWIEATRPDCICVQEVKAQQADMLDKFEIIDEMRGYFQF
AQKKGYSGVGVYTRHEPSDVVIGFSPGEFDAEGRYVELRFDTPQRKFSIISCYFPSGSSG
EERQAAKYRFLAELHPHLMRLKAERDFILCGDVNIAHTNADIKNWRSNQKNSGFLPEERA
WMTQILEKETEAGGLVDVYRVLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAIAA
LARREHIYKDQKFSDHAPITIDYEYKL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattaaccagcctcaacctcaacggcatccgctctgccgccaccaagggtgtg
attccctggatcgaagcgacccggcccgattgtatttgcgtgcaggaagtcaaggcacag
caagcggatatgctggacaagttcgagatcatcgacgagatgcgcgggtacttccagttt
gcgcagaaaaagggctactccggcgtcggcgtctacacgcggcatgagcccagcgacgtc
gtgatcggtttctctccgggtgaattcgatgccgaaggccgttatgtggaactgcgcttt
gacaccccgcagcgcaagttctccatcatcagctgctactttccaagcggcagctcgggc
gaggagcgccaggccgccaagtaccgctttctggccgagctgcatccacacttgatgcgc
ctcaaggccgagcgcgacttcatcctgtgcggagatgtgaacatcgcccacaccaatgcc
gacatcaagaactggcgcagcaaccagaagaacagcggttttctgcccgaagagcgcgcc
tggatgacgcagatcctggaaaaggagaccgaggccggtggcctggtggatgtctaccgc
gtgctccaacccgataccaccgacgcttgctacacctggtggagcaaccgaggccaggcc
tatgccaacaatgtgggatggcgtctggactaccacctggccacccccgccatcgcagcc
ctggcgcgccgtgaacatatctacaaagaccagaagttctccgaccacgcgcccatcacc
atcgactacgagtacaagctgtaa
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