Comamonas odontotermitis: LAD35_19155
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Entry
LAD35_19155 CDS
T07833
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
codo
Comamonas odontotermitis
Pathway
codo00550
Peptidoglycan biosynthesis
codo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LAD35_19155 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
codo01002
]
LAD35_19155 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
codo01011
]
LAD35_19155 (dacB)
Enzymes [BR:
codo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LAD35_19155 (dacB)
Peptidases and inhibitors [BR:
codo01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LAD35_19155 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
codo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LAD35_19155 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
UBB16877
LinkDB
All DBs
Position
complement(4175174..4176799)
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AA seq
541 aa
AA seq
DB search
MQHQVRTETPLRSTLSFADSTSNGSRPWLQSIAIAMIALGQVACAQTPAMQGAERTTPAA
GAVQVAPNPSPAVRAPVAQSVPAAPVQPASTIATGRLPAEVEAALQRGKLAPDSVSVVVM
DASGTQRPLLDVRSDVQRNPASVMKLVTTFAALELLGPAYTWDTSVSTDGSIAKGALNGN
LYIQGSGDPKLVMERLWLMQRRLQDRGVKVIVGDVVLDRSAFQLPPIDPAYFDNEPFRPY
NAVPDALLVNYKSMTMSFMPDAAAGVARIAYEPAIANMNLPATVPLVNTKGGCGNWRAAL
KANFAVAGQIQFAGGYPAACEENSWSVAPAAPESFAPRVFEGMWREAGGKITGQVRFGTA
PQGAAPLMRFDSPSLTEVVRDINKYSNNVMAQQVFLTLGKQRAGVGTFEGGRQAVAQWWS
ERMGGMSQPTVDNGAGLSRDARVTAGGLAKMLSVAWTSNVMPELMASMPIVGVDGTMKKS
KSSAVGGAHLKTGTLRDASAIAGYVNGANGRRWVVVALANSDNAPAARPAWDALIDWVAA
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaccaggttcgtaccgagacacccctccgctcaaccctttctttcgcagacagc
accagcaatggcagccgcccatggctgcaatccattgccattgccatgattgcgctcggc
caggtggcctgcgcgcagacccctgccatgcaaggcgccgagcgcacaacgcctgcggca
ggggcagtgcaggtggcgcccaatccctctcctgccgttcgcgcaccggttgcacagtct
gtgcctgcagctcccgtgcagcctgccagcaccattgccacgggccgtctgcctgctgag
gtcgaggccgcgctacaacgcggcaaactggcacccgattccgtatcggtggtggtgatg
gacgccagtggcacccagcgccccttgctggatgtgcgcagcgacgtacagcgcaacccc
gcatcggtgatgaaactggtcaccacctttgccgcgctggagctgctgggccccgcctac
acctgggatacctccgtcagcaccgatggcagcatcgccaagggagcgttgaatggcaac
ctctacatccagggatcgggcgaccccaagctggtgatggagcgcctgtggctgatgcaa
cgccgcctgcaggatcgcggcgtcaaggtcatcgtgggcgacgtggtgctggaccgcagc
gcgtttcagctgccacccatcgacccggcctactttgacaacgaacccttccgcccctac
aacgcggtgcccgatgccctgctggtcaactacaaatcgatgaccatgagcttcatgccg
gacgccgctgcaggcgtggcgcgcatcgcctacgagcccgccattgccaacatgaacctg
ccggccactgtgccgctggtgaacaccaagggcggctgcggcaactggcgcgccgcgctc
aaggccaattttgccgttgcaggccagatccagttcgcaggcggctaccccgcagcctgc
gaggaaaacagctggtccgttgcgcccgcagcccccgaaagctttgcaccccgtgtgttc
gaaggcatgtggcgcgaggccggtggcaagatcaccggccaggtgcgctttggcactgcg
ccgcagggcgccgcgccgctgatgcgctttgattcgcccagcctcaccgaggtggtgcgc
gacatcaacaaatacagcaacaacgtcatggcgcaacaggtcttcctcaccctgggcaag
cagcgcgccggtgtcggcacctttgaaggtggccgccaggcggtggcccagtggtggagc
gagcgcatgggcggcatgagccaacccacggtggacaacggcgcaggcctctcgcgcgat
gcgcgcgttaccgcaggggggctggccaaaatgctgtccgtcgcgtggaccagcaacgtc
atgcccgagctgatggcctccatgcccatcgtgggtgtggatggcaccatgaaaaagagc
aaatcgagcgccgtaggcggcgcccacctcaagaccggcaccttgcgcgacgcctcggcc
attgcaggctacgtcaacggcgccaacggccgccgctgggtggtggtagccctcgccaac
agcgacaacgcccctgcagcgcgccctgcctgggatgcactgatcgactgggtggcggcg
cagtga
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