Comamonas flocculans: FOZ74_07715
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Entry
FOZ74_07715 CDS
T06146
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
cof
Comamonas flocculans
Pathway
cof00550
Peptidoglycan biosynthesis
cof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FOZ74_07715 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cof01002
]
FOZ74_07715 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cof01011
]
FOZ74_07715 (dacB)
Enzymes [BR:
cof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FOZ74_07715 (dacB)
Peptidases and inhibitors [BR:
cof01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
FOZ74_07715 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cof01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
FOZ74_07715 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QEA12924
UniProt:
A0A5B8RW59
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All DBs
Position
complement(1583841..1585307)
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AA seq
488 aa
AA seq
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MSRFLPLLRLALLASCCLAGGAGFASAPAPTPAEPVHAGAQAALPAPVLAALQRAKVAPE
ALSAVVLPVQGESGRLLWQGELLRNPASVMKLVTTYAALELLGPAYTWQTPVYVDGQMHG
DTLRGSVYIQGRGDPKLVVERVWLLLRRLQAQGIRKIDGDIVLDRSAFVLEPHDAGEFDG
EPWRPYNVAPDALLVNFNALTLDFIPDVAAGVARIGHEPPLAGMEIPATVPLAAPGSACG
DWRAQLQADFAQPGRITLAGSYPAACGERLWSVAPADPASFGPRAIAGMWRALGGTLGGM
VRQGSVPAGLQPAFASTSPALSEIVRDINKYSNNVMARQLLLSLALEQGGSGTLQAAQAV
LGQWWSGHGGQAQELVLDNGAGLSREGRISALALARLLQQAWASPVMPELLSSLPITGVD
GTLRRRKGLAQGAGHLKTGSLRDVAAIAGYTQGKSGRRYVLVAIVNHANALAARPALDAL
VDWVWAER
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggtttctgcctctgctgcgcctggcgctgctcgcaagctgctgcctggcgggc
ggcgcgggctttgcctctgcgcccgcaccgacgcccgcagagccggtgcacgccggcgcg
caggccgcattgcccgcgccggtgctggcggcgctgcagcgggccaaggtggcgcccgag
gcgctgtccgcagtggtgctgccggtgcagggcgagagcgggcgcctgctgtggcagggt
gagctgctgcgcaaccccgcttcggtgatgaagctggtgaccacctatgccgcactggag
ctgctcggcccggcctacacctggcagacgccggtctacgtcgacggccaaatgcacggc
gacacgctcaggggctcggtctacatccagggccggggcgaccccaagctggtggtcgag
cgcgtctggctgctgctgcgccgtctgcaggcccagggcatacgcaagatcgacggcgac
atcgtgctcgaccgcagcgccttcgtgctcgagccgcacgacgccggcgagttcgacggc
gaaccctggcgcccctacaacgtcgcgcccgacgcgctgctggtgaacttcaacgcgctg
acgctggacttcattcccgacgtggccgccggcgtggcgcgcataggccacgagccgccg
ctggcgggcatggagattccggcgacggtgccgctggccgcgccgggcagcgcctgcggc
gactggcgcgcgcagctgcaggccgactttgcgcagcccggacgcatcacgctggcgggc
agctacccggcggcctgcggcgagcgcctgtggtcggtggcgccggcggacccggccagc
tttggcccccgcgccatcgccggcatgtggcgggcgctcggcggcacgctcggcggcatg
gtgcggcagggcagcgtgccagccgggctgcagccggcctttgccagcacttcgcccgcg
ctctccgagatcgtgcgcgacatcaacaagtacagcaacaacgtgatggcacgccagttg
ctgctgagcctggcgctggagcagggcggcagcggcacgctgcaggcggcgcaggcggtg
cttggccagtggtggagcgggcacggcgggcaagcgcaggagctggtgctggacaacggc
gccggcctgagccgcgaaggccgcatcagcgccctggcccttgcgcgtctgctgcaacag
gcctgggcctcgccggtgatgcccgagctgctctcgtcgctgccgatcaccggcgtggac
ggcacgctgcgccggcgcaagggcctggcgcagggcgcggggcacctgaagaccggcagc
ctgcgcgacgtcgcggccatcgccggctacacccagggcaaaagcgggcgccgctacgtg
ctcgtcgccatcgtcaaccatgccaacgcgctcgccgcgcgtccggcgctggacgcgctg
gtggactgggtctgggccgagcgctga
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