Cohnella abietis: KCTCHS21_37980
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Entry
KCTCHS21_37980 CDS
T05979
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cohn
Cohnella abietis
Pathway
cohn03030
DNA replication
cohn03430
Mismatch repair
cohn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KCTCHS21_37980 (polC)
03430 Mismatch repair
KCTCHS21_37980 (polC)
03440 Homologous recombination
KCTCHS21_37980 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cohn03032
]
KCTCHS21_37980 (polC)
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_37980 (polC)
Enzymes [BR:
cohn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KCTCHS21_37980 (polC)
DNA replication proteins [BR:
cohn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KCTCHS21_37980 (polC)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KCTCHS21_37980 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
STI1-HOP_DP
Motif
Other DBs
NCBI-ProteinID:
BBI34399
UniProt:
A0A3T1D8J5
LinkDB
All DBs
Position
complement(4249806..4254116)
Genome browser
AA seq
1436 aa
AA seq
DB search
MQPTDDRRKRFEVLLQQAELPTEWLGQHFRDGFIEKVEIHRSRKEWTFYIGKETLLPKAI
YVGFVERVKAKLGHHAAIKKVMQYGQAVSTQSIVEEYWPVFVEWMQQEVPSVNGWLGKAD
LDAQGDLVTITLLNETNIEMARKKEVDIHAARFFEERFQRVFRVKLAVGEVSPETYTEFA
QKIEQENRDAIQQMMASVREEAPVVEGEAPQVLQHGYEIKDPALPIQEIREEEKKVTIQG
VIFGLETKELRTGSTLFQCYVTDFTDSLSIKIFGKNKEDIKMLNLLANGKWVKMRGKIEY
DRFLNPPELVMFPNDIREVLAPPEPKDTAEEKRVEFHLHTTMSTMDAVTPVDAYIKTAAK
WGHKAVAITDHANVQCFPDAAKAGKKHGIKVIYGVEANVVNDAVPMVIQPRQQSLADAEY
VVFDIETTGLSVTNNKIIELAGIKMINGQEVDRFETFVNPHEPIPYNIQQLTNITDEMVK
DAPELEPKLKEFIAFIGDAVLVAHNARFDIGFMQEACKQHGLPPLKNPALDTLELARFLH
PTMKNHRLNTLASLYKVSLDNHHRAIDDTIALGGILVGLLKEALLRGVTELESLNEVNGN
SWRTTRPFHCGIYATNAVGKKNLFKLISLSHTDYLNRVACVPKSKLIEHREGLIVISGCE
KGELFETVLNKSQEEAEDVAAFYDILEVQPIDFYMHLLDKGLVSSRAALEDALRRICRIG
EKLTIPVIATGNVHYLIPREKVFRDITINGITGFSPLKDQRKPDAHFRTTAEMLEAFQFL
GNEKAYEVVVKNTSELADRFEEIKLFPDKLFTPIIEGADEEIRTTCYDTAKGMYGEQLPQ
LVIDRLEKELVPIIKFGFSANYLISEKLVKKSNQDGYLVGSRGSVGSSVVAMFLGISEVN
PLPAHYFCLNSECRHSEWFLDGSVPSGFDLPDKLCPNCSQKMKGEGQDIPFETFLGFKGD
KVPDIDLNFSGEYQPQAHNYTKVLFTEKCVFRAGTIGTVAEKTAFGYTKKYEEEQGKSWR
GAELNRLASGCTGVKRSTGQHPGGIVVVPDYIDVEDVTPVQFPADDRNSEWKTTHFDYHA
FEDNLLKLDILGHDDPTMMRMLQDLTGVDPTTIPMNDPKVMSLFSSVSALGVSPQQIRSS
VATFGVPEMGTRFVRQMLEETKPSSFADLLQISGLSHGTGVWIGNAQELIKNNTCTIKTV
IGCRDDIMLFLIYKAGMDAALAFKITESVRKGRGLTPEWIEEMKRCKVPQWYIDSCLRIE
YMFPKAHAAAYVISAVRTAYFKLYYPIEYYATYYSVRAADFDVELFCQGYDAILKMLLEI
EEKGFQATTKEKSMISILEMGLEMTARGLKFKSIDLYRSDATRFIVDGDSLIPPYGAIAG
VGENAARNIAASRNDGDFLSIEDFQQRSKASKTIIEVLTGLGTFRGLPESNQLMLF
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgacggatgataggcgcaaacggttcgaggtgcttctgcagcaagcggaattg
ccgaccgagtggttggggcagcattttcgagatgggtttattgaaaaggtggaaattcac
cgttcccgcaaggaatggactttttatattggtaaggaaacgttattgcctaaggccata
tacgtaggatttgttgaacgggtaaaggcaaagcttgggcaccatgcggctattaaaaaa
gtaatgcaatacggacaagcagtatccacacaaagcattgtggaggagtactggccggtg
ttcgtggagtggatgcagcaagaggttccatcggtcaatgggtggctgggcaaagcggat
ttggacgcacaaggtgatcttgttaccattacactgttgaatgagacgaacattgagatg
gcgagaaagaaagaagtggatattcacgctgcacgatttttcgaggagcgatttcagcgg
gtttttcgtgtaaagcttgccgtcggtgaggtgagccccgaaacctacacagaattcgct
cagaaaatagagcaggaaaatcgcgatgcgattcagcaaatgatggctagcgtcagagaa
gaagcccctgttgtagagggagaggccccgcaagtgctacagcatggctatgagattaag
gaccctgctcttcctattcaggaaattcgtgaggaagagaagaaggttacgattcaaggc
gttatttttggattggaaacgaaagagcttaggacgggtagcacgctttttcaatgctac
gttacggactttacggattccttgtcgattaagattttcggtaagaacaaagaggacatt
aagatgttaaacctgcttgccaacggcaaatgggtcaaaatgcgaggaaagattgaatat
gatcggtttcttaatcctcctgagctcgttatgtttccaaacgacattcgtgaagttctg
gccccgcctgagcctaaagatacggccgaggaaaagcgcgtagagtttcatttacatacg
acaatgagcacgatggatgcggtaaccccagtagatgcctatatcaaaacagctgctaag
tgggggcacaaggccgtagctattacagatcatgcgaatgttcaatgtttcccggacgct
gcgaaagccggtaaaaagcatggaattaaagttatatatggcgtggaagctaacgtcgtc
aacgacgctgttccaatggtcattcagcctaggcaacagagcttggcagatgccgagtat
gtcgtattcgatatcgagacgacaggattatctgtcacgaacaacaagattattgagcta
gccggtattaaaatgattaacggccaagaggttgaccgttttgaaacctttgtaaatccg
catgaaccgattccttataacattcaacagttaacgaacattaccgatgagatggtaaag
gacgcacctgagcttgagccgaagctgaaggaatttattgcttttatcggagatgctgta
cttgtagcacataatgctcgttttgatattgggtttatgcaagaagcttgcaaacaacac
gggctgcctccattaaagaatccggctttagatacgcttgagctggcaagatttcttcat
cctacgatgaaaaaccatcgtttgaacacattggcatccttatataaggtttctctagat
aaccatcatagagctattgatgatacgattgcgttaggtggaattctcgttggattgctg
aaggaagctttgttacgcggggttactgagctggagtctttgaatgaagtgaatgggaat
agctggcgaacgactcgaccattccattgcgggatttatgctacgaatgcggttggaaag
aaaaatcttttcaaattgatctcattatctcataccgattatttgaaccgcgttgcgtgc
gtccctaagagcaaattaattgaacaccgagaaggcttgatcgtcatatcaggctgcgag
aagggcgagttattcgagactgttctgaataagtcgcaggaagaggctgaagatgttgct
gcattctatgatattcttgaggttcagccaattgatttctatatgcatctccttgataag
gggctagtcagcagtcgtgcggcattagaagatgcgcttcgtcggatttgtcgaataggt
gagaagctcactatcccggtaatcgcaacaggtaatgtccattacttaatccctagggag
aaagttttccgggacatcacgattaacggaattacgggatttagcccgcttaaggatcag
cgtaagccggatgcccactttagaacgactgcagagatgctcgaagccttccaattcctt
ggtaatgagaaggcatatgaggttgtcgtgaaaaatacgtctgagctggcagatcggttc
gaggaaatcaagctatttccagacaagctgttcactccgattatcgaaggtgcagacgag
gaaattcgtacgacctgctacgacacggctaaggggatgtatggagagcagctgccgcag
cttgtcattgacagactagagaaggaattggttccgatcatcaagtttggtttctctgcc
aactatctcatttccgagaagctggttaagaagtccaatcaggatggatatctcgttggg
tcccggggttccgttggctcgtctgtcgtggcaatgttccttggaatctctgaagtaaac
cctttgccagcgcattatttctgcctaaattcagagtgcaggcacagtgaatggttcctc
gatggtagcgtgccaagcggtttcgatcttccagacaagctgtgtccgaattgctcccaa
aagatgaagggcgaaggtcaagatattccgttcgaaaccttcctcggcttcaaaggcgat
aaagttcccgatatcgatctcaacttttctggtgagtatcaaccgcaagcacataattat
acgaaagtactatttaccgaaaaatgtgtatttcgtgcaggtacaattggaacagttgcg
gagaaaacagcatttggatatacgaagaagtacgaggaagagcaaggtaaatcttggcgt
ggtgcggagcttaatcgtcttgcctctggttgtacgggggttaagcgtagtacaggtcag
catcctgggggtatcgttgttgttcctgattacatcgacgtagaagatgttactccagta
caattccctgcagatgatagaaactcggagtggaaaacgactcatttcgattatcatgcc
tttgaggataatttacttaagctcgatattcttggtcacgatgatccgacgatgatgcgg
atgctgcaggatttaaccggtgttgatccaacgaccatccctatgaatgatcctaaagta
atgagcctttttagctccgtgagcgcactaggtgtttctccacagcaaatccgttctagc
gtcgcgaccttcggtgtgccggagatgggtacccgatttgttagacagatgcttgaggag
acgaagccgtcgtcctttgccgatcttttgcaaatatcaggcttatcacacggtacaggc
gtatggattggtaacgctcaagagctcattaaaaataacacttgcacaattaagacggta
atcggctgtcgggatgacatcatgctattcctcatttataaagcaggtatggacgccgca
ttagcgttcaaaattacggagagcgtgcggaagggaagagggctcactccggagtggatc
gaggagatgaagcgatgcaaggtaccgcaatggtacatcgattcttgcttgcgcattgaa
tatatgttcccgaaagctcatgctgctgcttatgttatttcggcggtaagaacagcgtat
tttaagctatactatccaatcgaatattacgcaacttactactcagtacgtgctgcagat
ttcgatgttgagctgttctgtcaaggctatgatgccatcctcaagatgctgcttgaaatc
gaggaaaaaggctttcaagcaacaacgaaggagaagagcatgatatccattctagagatg
ggtctcgaaatgacagctcgcggcttaaaattcaagtcgatagacttatataggtccgac
gctacacggtttattgttgatggtgacagcttaataccgccttatggagctatcgctgga
gtgggcgagaatgctgctcgcaacattgctgcttcacggaatgatggtgactttttatcc
attgaggatttccagcaacgctcaaaagcaagtaaaacaataatagaagttttgaccggt
ttaggtaccttccgagggctgcctgagtccaatcagctcatgctgttctag
DBGET
integrated database retrieval system
