Cohnella abietis: KCTCHS21_56990
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Entry
KCTCHS21_56990 CDS
T05979
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cohn
Cohnella abietis
Pathway
cohn03022
Basal transcription factors
cohn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KCTCHS21_56990
09124 Replication and repair
03420 Nucleotide excision repair
KCTCHS21_56990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cohn03021
]
KCTCHS21_56990
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_56990
Enzymes [BR:
cohn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KCTCHS21_56990
Transcription machinery [BR:
cohn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KCTCHS21_56990
DNA repair and recombination proteins [BR:
cohn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KCTCHS21_56990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
BBI36300
UniProt:
A0A3T1DDT8
LinkDB
All DBs
Position
complement(6434284..6436569)
Genome browser
AA seq
761 aa
AA seq
DB search
MQDTVALSVRSLVEYVFLSGSIDSGFRSISSLSEGTKAHQKIQKQYGEQDRKEVYLSTEI
PFEELLFVVDGRCDGLLIGENGGVIIDEIKSTSRDISLMTEDDAALVHWAQVKCYAYMFA
LENGVQQMRVRLTYVHVDTEEQKRFEQEVTFEELAIYITDIIKQYAPYARLLHRNKGLRD
ASIQDLAFPFTTYREGQRKLVGSVYKAIDEGRKLFAKAPTGIGKTISTLYPAIKAIGRGN
IQHLFYLTARTITRTAAEQALSLMQSQGLNFRSVTVTAKDKICFQDEVDCRKEQCPYAEG
YYDRINGAILDLLDNETLISRGVIEQYARKHRVCPFEMSLDAAYGADAVICDYNYLFDPR
VSLKRLGGEFKRDTVLLVDEAHNLIDRAREMYSAELDKKAFLELEREFKGVHGDIHKAAK
AINKWFIESRKQSNGGAVVSKEPPKELLELVEAFVAQAERGLATGGTAAGSVRLLEVYFA
TVSFIRIGKLYDDCYVTYSEVLRNDVRLKMFCLNPSRLLNQMGKGFRSHVFFSATLSPLN
YFMDMLGAEEEDYSVTLGSPFAKEQWEVSIVPISTKYADREETKGTLVHLLRGLVGIRPG
NYLYFFPSYAYMNAVYEDFIAENKDESVRTLLQTPEMAEGMRESFLAEFDENNQGSLVGF
AVMGGIFSEGIDLVGDRLRGVAVVGVGMPQIGMERNLIKSYFDEEGRNGFDYAYVYPGIN
KVLQAGGRLIRSEQDRGVLALIDDRYLQPQYSRLLPEEWRK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacggtagccctctctgttaggagcttagtcgaatacgtgttcctgagtgga
agcatcgactcggggtttcgatcaattagctcgctgtcagaggggacgaaggcccatcag
aaaatacagaagcaatacggcgagcaggatcggaaggaagtttatttaagcacggagatt
cctttcgaggagctcctatttgtcgtagatgggcgatgtgatgggctgctgattggcgaa
aatggtggcgtcattatcgatgaaatcaagtcgacttcaagggatattagtttaatgact
gaagacgatgctgcacttgtacactgggcgcaagttaaatgctatgcctatatgtttgcg
ctggagaacggggtgcagcaaatgcgtgttcgcttaacctatgttcatgtggacacggag
gagcaaaagaggttcgagcaggaagtaacctttgaggaattggcaatctatataacggat
attattaagcagtatgcaccctatgctcgattgcttcatcggaataaggggttaagggac
gcgagtattcaagatttagcgtttccttttacaacctatcgagaaggtcaaaggaagctg
gtcggttccgtctacaaggcgattgacgaggggagaaagctgttcgctaaggcacccacg
ggaatcgggaagacgatatcaaccttgtatccggctattaaagctatcgggcgaggtaac
attcagcatttgttctacttaacggcacgaaccattacaaggactgccgcagagcaggcg
ttatctcttatgcaatctcagggccttaatttccgttcggtgacagtcactgctaaggat
aaaatttgctttcaagatgaggtcgattgccggaaagagcaatgtccctacgcggaggga
tattatgatcgaataaacggagcaatacttgacctgctggacaatgaaacattgatcagt
cgtggtgtcattgagcagtatgcacgaaagcatagggtatgcccattcgagatgtcactc
gatgcagcttatggggcagatgctgtcatttgcgattacaattatttatttgacccacgc
gtttccttaaagcgcttaggcggggaatttaaacgtgatactgtcttgctagtagacgaa
gcacacaatttgattgatcgggctagagagatgtattctgccgaattggacaagaaggct
ttcctcgagctggagcgggagtttaaaggagttcacggggatatacataaagcggcaaaa
gcaatcaataagtggttcatcgagtctaggaagcaatctaatggaggggcagtcgttagt
aaggagccgcctaaggagcttttagagctagtggaagctttcgttgcccaagcagaacgt
gggctggcgacagggggaacagcggctggaagtgtaaggctactggaagtttattttgcg
actgtaagctttatcaggattggaaagctttacgatgattgctatgttacctactctgaa
gttcttcgtaatgatgtccggttgaaaatgttctgcttaaacccttcgcggctgcttaat
cagatgggcaagggatttcgttcgcatgtgttcttctcggctacactctcccctcttaac
tactttatggatatgcttggggcggaggaagaggattattctgtcacactcggttcacct
ttcgccaaggagcaatgggaagtatctattgttccaatctccacaaaatatgcggatcga
gaagagacgaaggggacattggttcatctgcttcgggggctggtgggcataagaccgggt
aattatttgtatttcttcccttcgtatgcctatatgaatgctgtttatgaggattttata
gcagaaaataaggatgagagcgtgcgaacactgctgcaaacaccggagatggctgagggg
atgagagagagctttcttgcggaattcgatgagaataatcagggaagcttggttgggttt
gctgttatgggtgggattttctccgaaggcattgatcttgtcggagataggctacgaggg
gtagctgtagtaggggtaggaatgcctcagatcggaatggagcgaaatttaatcaagagc
tacttcgatgaggaagggcgtaacggatttgattatgcctatgtgtaccctggcattaac
aaagtgctacaagctgggggaagactcattcgttccgagcaggaccgtggcgtacttgct
cttatcgacgaccgctatttgcagccccaatattctcgcttgctgcctgaagaatggcgg
aaataa
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integrated database retrieval system
