Corynebacterium pseudotuberculosis CIP 52.97: CPCIP5297_01220
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Entry
CPCIP5297_01220 CDS
T02054
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
coi
Corynebacterium pseudotuberculosis CIP 52.97
Brite
KEGG Orthology (KO) [BR:
coi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coi03032
]
CPCIP5297_01220 (topA)
03400 DNA repair and recombination proteins [BR:
coi03400
]
CPCIP5297_01220 (topA)
Enzymes [BR:
coi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CPCIP5297_01220 (topA)
DNA replication proteins [BR:
coi03032
]
Prokaryotic type
DNA Topoisomerases
CPCIP5297_01220 (topA)
DNA repair and recombination proteins [BR:
coi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPCIP5297_01220 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEQ05791
LinkDB
All DBs
Position
244418..247354
Genome browser
AA seq
978 aa
AA seq
DB search
MAEKSGPKRLVIVESATKAKKIAPYLGDDYIVEASVGHIRDLPRGAADVPTKYKKEPWAR
LGVNTENGFAPLYVVSPDKKKKVADLKQKLKLVDELLLATDPDREGEAIAWHLLEVLKPK
VPVKRMVFNEITKPAILAAAENTRELDANLVDAQETRRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRVIVERERERMAFVSAEYWDIEAEFDTGKPDTDGNPHQFTGRLTSVDGKR
VATGRDFNDRGELKGDAVVVNKQRAEALVAELTGAPMNVVKVEEKPYTRRPYAPFMTSTL
QQEAGRKLHFTSERTMRIAQRLYENGHITYMRTDSTTLSEQGLKAAREQAISLYGNDYVA
EGPRRYDRKVKNSQEAHEAIRPAGEHFATPGELHAQLDAEEFKLYELIWQRTVASQMADA
KGTSMKVTIAGKNAEFSATGRTITFPGFLRAYVEITKLSDGRDLADNAERHLPRLAEGDA
LDVNKLEVDEHSTNPPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRGYVYSRGNALV
PSWVAFAVVGLLEKSFSALVDYDFTSSMEDELDDIAAGREDGTEWLTGFYFGDAAASDAT
AESIARHGGLKALVGDNLEHIDARLVNSLELFQDSEGRAVNVRVGRYGPYIERQIGISAD
GEAEYQRANLSDTTTPDELTLDVAEKLFATPQSGRELGRNPKNDRMIVAKEGRFGPYVTE
LVNDDERAQVEAKAEEIVASERKAEDEQRAAEGKRAKNWETKTAVKQKEKRIAEIVDETL
KPGTASLFKDMEPATVTLEQALQLLSLPREVGVDPSDNAPITAQNGRYGPYLKKGNDSRS
LASEEQIFTITLDEARRIYAEPKRRGRGATSQSVIKELGDNDVSGKPMSVRDGRFGPYVT
DGTTNASLRRGDDPTELTDARANELLSERRAKEAADGGAEKKATKKAAKKSTKKTTAKKA
VKKPAKTTKRVVKAGRKK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagagcggacctaagcgccttgtgatcgtcgagtctgcgacgaaggctaag
aaaattgccccttacttaggcgacgactacatagtcgaggcctccgtggggcacattcgc
gatctcccgcgaggcgctgcagatgttcccactaagtacaaaaaggagccgtgggcccgg
cttggtgtgaacacagagaacggctttgcgcctttgtatgtggttagcccggacaagaag
aagaaagtcgccgatctcaagcagaagcttaagcttgtcgacgaactcctactggccaca
gaccccgaccgcgagggggaagccatcgcgtggcacttgcttgaggttctcaagcctaaa
gtgcccgtgaagcgcatggtgttcaatgagatcactaaaccggcgattctggctgctgcg
gagaacactcgtgagctggacgcgaacctggtcgacgcacaggagactcgtcgtatcctc
gatcgtctctatggctatgaggtctcccctgtgctgtggaagaaagtcatgccgcggctt
tctgctggccgcgttcagtcggtggctacccgcgtgatcgttgagcgggagcgtgagcgt
atggcttttgtatccgccgaatactgggatattgaggcggaatttgatacgggtaagcct
gatacggatggcaatccacatcaattcactggccgtcttacctctgtcgacggcaaacgc
gtggctacgggccgcgattttaacgaccgtggcgagcttaaaggcgacgcggtggtcgtg
aataagcaacgcgctgaggcattggttgcggagctgacaggtgctccaatgaacgtggtc
aaggtagaagaaaagccttacactcgccgcccttatgcgccgtttatgacttcaactttg
cagcaagaagctggacgcaagctgcactttacctctgagcgcacgatgcgtatcgcgcaa
cgtctgtatgaaaacggccatatcacttatatgcgtacggattccacgacgctgtcggag
caaggcttaaaagcggctcgggaacaagctatttcgctttacgggaatgattatgtggca
gaagggccgcgtcgttatgaccgaaaagtaaagaactcacaggaggctcacgaggctatc
cgtccggcaggagagcattttgctacccctggagagctgcacgcccagctcgatgccgag
gaatttaaactctacgagctcatctggcagcgcaccgtagcttcccaaatggcagacgcc
aagggcacatccatgaaggtgaccattgcgggaaagaacgctgagttctccgctactgga
cgaacaatcacgttccccggcttcctgcgcgcatacgtggaaattaccaagctttccgac
ggtcgcgaccttgccgataacgccgagcgtcacctgcctcgtctcgctgagggcgatgcc
ttagacgtgaacaagctggaagtcgacgagcactccaccaatccgcctgcgcgctataca
gaggcgtcgttggtgaaaaaaatggaggagctgggcatcggacgcccatcgacgtatgcc
tcgatcatcaagaccattcaagatcgcggatacgtttactcccgcggtaatgctctggtc
ccaagctgggtagcttttgcggttgtcggtcttttagagaagagcttctctgctcttgtc
gactacgatttcacctcgtcgatggaagatgagctggatgatatcgccgcaggacgagaa
gacggtactgagtggctcactggcttctattttggagatgccgcagcctccgatgccacc
gcagaatctattgcacgtcacggcgggcttaaagcacttgttggcgacaacctcgagcat
atcgacgcgcgtttggttaactccttagaactcttccaagactcagaaggccgtgccgtt
aatgtccgcgttgggcgatacggcccctatatcgaacggcagatcggtatcagtgctgat
ggcgaggccgagtatcagcgcgccaatctctcagacaccaccaccccagacgagctgacc
ctcgatgtggcggagaaactttttgcgactccgcaatctggccgtgagctgggtaggaac
cccaagaatgatcgcatgattgtggccaaggaagggcgttttggtccttacgtcaccgag
ttggttaacgatgatgagcgtgctcaggtggaggccaaagcagaggagatcgttgcttct
gagcgcaaagctgaggatgagcagcgtgctgccgaaggcaaacgcgccaagaactgggag
actaaaactgcagttaagcagaaagaaaagcggatcgctgagatcgtcgatgagactctg
aagccaggaaccgcctcactgttcaaggatatggagcctgccacagttacgcttgagcaa
gccctccagcttttgtccttgccacgcgaggtgggagttgatcctagcgataatgcaccc
attaccgcgcagaacggtcgctatggcccctacctgaaaaagggtaatgactcgcgctca
ctggcgagcgaagagcaaatctttactatcaccctggatgaggcccgccgaatttacgct
gaacctaaacgacgcggccgaggcgctacctcccagtctgtgattaaagaactaggcgat
aatgacgtctccggcaagccaatgtccgtgcgtgatggacgttttgggccttatgtaacc
gatggcactaccaatgcttctttgcgacgaggcgacgaccccacggagcttacagacgct
cgtgctaacgagctcctttcggaacgccgtgccaaggaggccgcggatggcggcgcagaa
aagaaagctacgaaaaaagctgcgaagaagtccaccaagaaaaccacggcgaaaaaagcc
gtgaaaaagcctgcaaagactacaaaacgagtggtcaaagctggacgtaagaaatag
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