KEGG   Colwellia sp. PAMC 21821: A3Q33_08030
Entry
A3Q33_08030       CDS       T04816                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
colw  Colwellia sp. PAMC 21821
Pathway
colw02020  Two-component system
Brite
KEGG Orthology (KO) [BR:colw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A3Q33_08030
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:colw02022]
    A3Q33_08030
Two-component system [BR:colw02022]
 NtrC family
  HydH-HydG (metal tolerance)
   A3Q33_08030
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 Mg_chelatase MCM AAA_2 FleQ cREC_REC AAA AAA_3 HTH_30 AAA_16 HTH_23 HTH_17 RsgA_GTPase HTH_29 HTH_50 HTH_Tnp_ISL3 AAA_7 DUF815
Other DBs
NCBI-ProteinID: ARD44267
LinkDB
Position
1902291..1903619
AA seq 442 aa
MLQVLLVDDDSEFTEVACQIIEFLGHDVCVASNLKEAEEWLNQQKFDHVLLDFMLPDGSG
LHLIDFLKQNHLSPHVTLITGHPSVKGMLAGLCGPKVSYIVKPLQREDIEATLNINSKKP
KNNNSKMPTLHFGCLVGESKPMQELYTMIERVAKTSANVMLMGESGVGKEVVANAIHAST
GATDPIIATNCGALSKDLISSELFGHEKGAFTGAVARKEGVFVRAGSGTLFLDEITEMPI
DMQPNLLRVLENKRVIPVGGTQEIEVNCRVVSATNRTMAELAEGKVIREDVYYRLAVFPI
NIPPLSERKEDIPLLAEVFLQQLNNENNATFKWTQEQLDILKNNSWPGNIRELRHAIHRA
FIMSDPTNQSIQLPTNFISPFASAANTSSAVAAGQTIEDLEKELIRVTLDKVDGNKTQAA
EMLGISTKTLYNRLHAYGDFSA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgctacaagtactgttggttgatgacgactctgaatttactgaagtcgcatgccagata
atagaatttcttggtcatgatgtttgtgtagcatcgaatcttaaagaagctgaagaatgg
cttaatcaacagaaatttgatcatgttttactcgactttatgttgcccgacggtagtggt
ctacaccttatcgattttttgaaacaaaatcacctcagcccccatgttaccttgattact
ggccatccttccgttaaaggcatgcttgcagggttgtgtggccctaaagttagctacatt
gttaaaccattacaacgtgaagatatagaagctacacttaatataaacagtaaaaaacca
aagaataacaatagtaaaatgccaacactgcattttggttgcctcgtcggtgagtcaaag
cctatgcaagagctatacactatgattgaacgcgttgctaaaacatcggctaatgttatg
ttaatgggtgaaagtggcgtcggcaaagaagtcgtagccaacgcgatacacgcatctact
ggcgcaactgaccctattattgcgaccaactgtggtgctttatcaaaagatttgattagt
agtgaactcttcggtcacgaaaaaggtgctttcacaggcgctgtagcgcgtaaagaagga
gtgtttgttcgagctggcagcggtacactttttcttgatgagataaccgaaatgccgatc
gatatgcagccaaatttattgcgggtgctagaaaataagcgcgttattcctgttggcggc
acgcaagagattgaagttaattgccgagtggtatctgccacgaacagaacaatggcagag
ctagccgagggtaaagtgattcgtgaagatgtttactaccgcttagcggtttttccaatc
aatattccacctcttagcgaaagaaaagaagatattccactactggcagaagtattttta
caacagcttaacaatgaaaacaacgccacgtttaagtggacacaagagcaactagatatt
ttgaaaaacaatagttggccaggtaatattagggaacttagacacgctattcatcgtgca
tttatcatgagtgacccaacaaaccaaagcattcaattacccactaattttatctcgccg
tttgcctcagcggctaacacgtcatcagccgtagctgccggacaaactattgaagatctt
gaaaaagagctcattcgtgtcacccttgataaagtcgatggtaacaaaactcaagcggct
gaaatgctgggcattagcaccaaaacactgtacaacaggttacatgcttatggtgacttt
tccgcttaa

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