Commensalibacter melissae AMU001: D9V35_06350
Help
Entry
D9V35_06350 CDS
T05684
Name
(GenBank) PDZ domain-containing protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq01503
Cationic antimicrobial peptide (CAMP) resistance
coq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D9V35_06350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
D9V35_06350
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
coq01002
]
D9V35_06350
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
coq03110
]
D9V35_06350
Enzymes [BR:
coq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
D9V35_06350
Peptidases and inhibitors [BR:
coq01002
]
Serine peptidases
Family S1: chymotrypsin family
D9V35_06350
Chaperones and folding catalysts [BR:
coq03110
]
Other chaperones and cochaperones
DegP / HtrA
D9V35_06350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ
PDZ_6
Motif
Other DBs
NCBI-ProteinID:
AYN87138
LinkDB
All DBs
Position
1401114..1402286
Genome browser
AA seq
390 aa
AA seq
DB search
MFVPIEYSNQIKKKLGLNLKTYLIIVLFNFPVYAQDINKKDIEPSKTVIPSDTFTASATP
LVENGPLTFSPLVKKVVPAVVNISVSQNIYTKQSRNIHIPPSLKGTPFEKEFRQRQHTRN
RRVTEAGSGFIIDPHGIIVTNTHVIGTSNNITVYLANGKRFTAKVIGNDSLTDIAVIKID
SEHPLPYVQWGDSRKVEVGDWILAAGNPFGLGSSVTAGIVSARGRDIGSSPFDDFFQLDA
PMNPGNSGGPSFNLAGQVIALNTAIVSPTGSSVGIGFGIPSEIAAPIVTQLCKTGFIDRG
WLGVTLEEDSGHNGVKIIDLDLDGPAYKAKIKINDRVELIDDQHVDTIRTFIKTVAIAHP
GSNLQLTIRRNKKTIKLDVTVGHRPKDDVE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaccaattgaatattcaaaccagataaaaaaaaagctaggtctcaatctcaag
acttatctcattattgttttattcaattttcccgtctatgcccaggatataaataaaaaa
gatatcgaaccatcaaaaacagtcattccatccgacacatttacggcctccgcaacacca
cttgtagaaaatgggcctctgaccttttccccgctagtgaaaaaagttgtaccagccgtt
gttaacatttcggtttcccaaaatatatatacaaaacaatccagaaacattcatatacca
ccctccttaaagggaacaccatttgaaaaagaattcaggcaacgtcaacatacccgcaac
cgtagggttacagaagctgggtctggttttatcattgatccccatgggatcatagtaacc
aatacgcatgtaatcgggacttccaacaacataacagtatatcttgcgaatggaaaacgt
ttcacagcaaaagttatcggtaatgattctctcacagacatagcagtcatcaaaattgat
agcgaacatccccttccctatgtacaatggggtgacagtcgcaaagtggaggttggtgac
tggattcttgctgcaggaaacccttttggccttggttcttccgtcactgccggaattgta
tcagctcgtggtcgcgatattggttccagcccttttgacgatttttttcaattggatgct
ccaatgaatccgggaaattctggaggaccatcctttaaccttgccggacaagttatcgcc
ttgaataccgcaattgtttcccctaccggaagttctgttggaattggttttggtatcccc
tctgaaatcgccgcccccattgttactcaactatgtaaaacaggatttattgaccgcgga
tggcttggtgttacccttgaagaggattctggacacaatggagtgaaaatcattgatctt
gatctggatggcccggcctacaaggcaaaaatcaaaattaatgaccgcgttgaattaatt
gacgatcagcatgtagacacaattcgtacttttattaaaacagtggccattgcacatcct
ggatcaaatttacaactgacaataaggcgcaacaagaaaaccatcaaacttgatgttacg
gttggtcatcgaccaaaagatgatgtagaataa
DBGET
integrated database retrieval system
