Commensalibacter melissae AMU001: D9V35_08540
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Entry
D9V35_08540 CDS
T05684
Name
(GenBank) PDZ domain-containing protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq01503
Cationic antimicrobial peptide (CAMP) resistance
coq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D9V35_08540
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
D9V35_08540
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
coq01002
]
D9V35_08540
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
coq03110
]
D9V35_08540
Enzymes [BR:
coq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
D9V35_08540
Peptidases and inhibitors [BR:
coq01002
]
Serine peptidases
Family S1: chymotrypsin family
D9V35_08540
Chaperones and folding catalysts [BR:
coq03110
]
Other chaperones and cochaperones
DegP / HtrA
D9V35_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
DUF6288
GRASP55_65
Tricorn_PDZ
Peptidase_S46
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
AYN87530
LinkDB
All DBs
Position
complement(1880850..1882403)
Genome browser
AA seq
517 aa
AA seq
DB search
MDKYSKKKQTVLELINHVCGKKIKQGLLASLVLGSAVTGYNSAQATDLLKDHSDAIKPVT
STQNLPNFVNLVKQVKPAVVSITSRVVVGDNDDSMMGNGFPNGDDNMNPFPFPFPFPMFP
QQMPKQVAEARGSGFIISPDGYIVTNNHVVKGAKKITIALETGAKYQAKIIGRDSKTDLA
LLKIQSEKPLPFIQLGDSNGIEPGEWVIAVGDPYGLGGTVTAGIVSARGRDIGDTPYDSF
IQVDAPINRGNSGGPLFSQDGKVIGVNTAILSPSGGSIGIGFAIPSNTVKNVVTQLEKTG
HVTRGYLGVMGQMITPSMVKMLKLPPSEHGIPPKGVLIASVANNSPAEKAQLKVGDVILS
LNDKKVENPRDLANQVAAITPNTMIDLNILRNGTRKVVKVQVGNLNEDTKSKKTPAPAPG
SLGVSLSLLTPEIRQQAGIDEKIKGVIVTSIKNDSPADHAGLQNGDVIVSVNNQDVDKPE
MANRLISSSLKTDKTVLLRILRDGQSIFIAVTLGDND
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggataaatattctaaaaaaaagcaaacggttctagagcttataaatcatgtttgtgga
aaaaaaattaaacagggtttattggcttctttagtgctgggcagtgcagtcacaggttat
aattcagcccaggcaacagatttgttaaaggatcattctgatgcgatcaagccggtaacc
tcaacgcaaaatctgcctaattttgtaaatttggttaaacaggtcaaacctgccgttgta
tccattacctcacgggttgttgtcggagacaatgatgattcaatgatgggaaatggattt
cccaatggcgatgataatatgaatccgtttccgtttccttttccctttcccatgtttcca
caacaaatgcccaagcaggtggctgaggcacgtggatcaggatttatcatttcgcctgat
ggttatatcgtaaccaataatcatgttgttaaaggggcgaagaaaataacgattgccctg
gagactggtgcgaaatatcaggcaaaaattattggaagggattcaaaaacagatttggcg
ttgttaaaaatccagtctgaaaaacctttgccatttatccagcttggagattcaaatggt
attgaacctggtgaatgggtaattgcagttggagatccatatggtttggggggtaccgtt
accgcagggattgtatctgcccggggaagggatatcggtgatactccttacgattccttt
atccaggttgatgctccaatcaatcgtggaaattcgggagggcctcttttttctcaagat
ggtaaggttatcggtgttaatacagcaattttatctccatcaggaggatcaatcggtatc
gggtttgccattccatcaaatacggtgaaaaatgtcgttactcaattggaaaagacagga
catgttacccgtggttatttaggggttatgggccagatgatcacaccttcaatggtgaaa
atgttaaaattgcctccatctgagcatggtattccaccaaaaggggttttgattgcatct
gttgcaaacaatagtcctgctgaaaaggcccaattgaaggttggggacgtcattctttct
ttgaatgataaaaaggttgaaaatccgagggatcttgccaaccaggttgcggctattact
ccaaatacaatgattgatctgaatattttgcgaaatggcacgcggaaagttgtaaaggtt
caggtaggtaatctaaacgaggataccaagagtaaaaaaacaccagctcctgctcctggc
agtttgggtgtctccttatcattattaacccctgaaataaggcaacaggctggtattgat
gaaaaaatcaagggggtaattgttacctcgattaaaaacgattccccagctgatcatgcc
ggattgcagaacggtgatgtcattgtatccgttaataaccaagatgttgataaaccggaa
atggcgaaccggttgattagttcatctctaaaaacagacaaaactgttttattgaggatt
ttaagagatggccagtccatatttatcgctgtcacactcggagataatgattaa
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