Chitinophaga oryzae: HF329_09065
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Entry
HF329_09065 CDS
T07451
Name
(GenBank) PAS domain S-box protein
Organism
coy
Chitinophaga oryzae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_4
PAS_9
PAS
PAS_3
HATPase_c
HisKA
PAS_8
PAS_11
PAS_10
DUF769
Motif
Other DBs
NCBI-ProteinID:
QJB31442
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All DBs
Position
complement(2187571..2191440)
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AA seq
1289 aa
AA seq
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MLNQSAAARTEEMEHFRKFFLLSNDLFCLVGSKGTFEMVNPAFGRALGWKPEEILGRSVF
DIIHPDDIDSSGEQLKGLNEGINTVNFVNRMRTINGEYIWLQWMASPEVSTGHIFAVGRD
ISQVIYQERQLQESEHQFRVFFNNSRGMMCMHDLDGKLLAVNHASAESLGYQPAELIGRM
LWEIVPAVFREGVFEYLETIKREKQVSGLMHTCHRDGSIRIWLYNNVLEYSVDGNPYVIA
NALDITLRHALEKDLKWTTEMLERTNSVARIGFWHLDLEKQLPYWSDVTRRIHEVGDDYV
PTLEKALEFYKGDNRTAIEAVVNRGIEFNEPWDIELEIVTAKGRNIWVRSIGSPEFRDGK
CVRLYGTFQDIDRQKRLEEEIQRSRKLLEDILQSATDVSVIATALDGTITLFNSGAENLL
GYSSREMVGKQTPVAFHEPAELSERAAAKGVSPVEVFAEAAAGQRPGAQQEWTYIRKNGS
AVNVSLVISAIHNMNNELTGYLHIATDITDRKKAEQLLLDEKAKLSAFVKHTPAAVVMLD
KRLRIIAYSNAWQEDNQLTGQQLYGKMVYDLLPNIPAGFKQIYRDTLAGKVDKNGEFIWR
PPGWEHDQHLHWEVRPWFYHDGGVGGITILTEDVTANAMHQEELQQAKQLAEQASVAKSE
FLANMSHEIRTPLNGIIGFTDLVLKTRLNEVQHQYLSIVNQSASTLLNIINDILDFSKIE
AGKLELDIQKQDIFEVSSQVSDMVKFQAQSKGLEMIYDVSADLPRFIWTDQLRLKQILVN
LLSNAVKFTEKGEVGLKIYPVSPANAELYRTIRFEVSDTGIGIRKERQEKIFEAFSQEDI
SITKRYGGTGLGLTISNKLLGLMNSRLQVESIPGEGSTFFFEITVETADGPPVTWQHIEA
VKKVLVTDDNEHNRTILQQMLLLKGIETDMARSGFEALQLLMEGRTYDAVLMDYHMPVMD
GLETLRKMRQMADQLGTWTPVVLLYSSSDDETVQRVCEELKVEQRLVKPVKMQDLYNALA
HLSLKNSDQTDIAGATTQKLQPERTSLKVLLAEDNSVNMLLIKAIITRSVPMATIVEAKT
GLEAVELYMSEQPDLVFMDIQMPEMDGYDATRRIRELFPEKHTPIVALTAGNTKGERERC
IAAGMDDFLSKPFVEDEILALVNKWGTGDEPAGIEAAGVRPLDLSVLMGYLGSDTKQDPL
LRETLSLLLGDCKSVKAEITGQDMSQHPKRIREICHSMRSVTTYAGLTGLEKAIRDTETN
GVTTEQLQVLATELDKAIVAVQLALDQLP
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccagtcggctgctgcacgcacggaggaaatggaacatttccggaagtttttt
ctattgtccaatgatttgttctgcctcgtaggcagtaaaggtacctttgaaatggtaaac
cctgcctttggccgggcgctgggttggaaacctgaagaaatactgggccggtccgttttt
gatattattcatccggacgatattgacagttcgggggagcaactgaaagggctaaacgaa
ggaatcaatacggtgaactttgtaaaccgtatgcggacaatcaacggcgaatatatatgg
ctgcaatggatggcttcccctgaggtgtccaccggacacatctttgcggtgggaagagat
atctcgcaggtgatctatcaggaacgccagctgcaggaaagcgaacaccagttcagggta
ttctttaataactcgaggggcatgatgtgtatgcatgacctcgatggaaaactgctggcg
gtaaatcacgccagcgctgagagtctcggttatcagcctgccgaactgatcggcagaatg
ctttgggaaatcgttcctgcggttttcagggagggtgtttttgaatacctggagaccatc
aaaagagaaaaacaggtgagtggtctgatgcatacctgccaccgcgatggcagcatccgc
atctggttgtataataacgtactcgaatactctgtggacggaaacccatacgtgatcgcc
aatgcgctggatatcacgctgcggcatgccctggaaaaagacctgaaatggaccacggaa
atgctggagcggaccaacagcgtagctcggattggattctggcatctggacctggaaaaa
caactgccttactggtctgatgtgacacgtcgtatccatgaagtgggagacgactatgtc
ccgacactggagaaagcgctggaattttacaaaggggacaaccgcaccgccatagaggcg
gtggtcaacagggggattgaatttaatgaaccctgggatattgaactggaaatcgtcacc
gccaaaggcaggaatatctgggtccgttctatcggcagcccggaattcagagacggcaaa
tgcgtccggctgtatggcaccttccaggacatcgaccgccaaaagcggctggaagaagag
atacagcggtcgcgcaaactgctggaagacatcctgcaatcggctaccgacgtcagcgtc
atcgcgacagcgttagacggcaccattaccttgtttaacagcggtgcggaaaacctgctg
ggatattcctcccgcgaaatggtcggcaaacaaacgccggtcgctttccatgagccggcg
gaactgtcggaaagagcggcggccaaaggcgtgagccctgtggaggtatttgccgaagca
gcggctggtcagcgccccggcgcacagcaggaatggacctacatccggaaaaacggctct
gcggtgaacgtgtcgctcgtcatttccgctatccacaacatgaacaatgaactcaccggc
tatcttcatattgctactgatatcacagacagaaaaaaagcggagcaactgctgctcgat
gaaaaagccaagctttccgcttttgtgaaacatactcccgcagcggtggtgatgctggat
aaacggcttcgtattatcgcctatagtaatgcatggcaggaagacaaccaactgacgggg
cagcaactgtatggtaaaatggtctatgacctgttgcccaatatccccgcgggattcaaa
cagatctaccgcgacacgctggccggtaaggtggacaagaacggcgaattcatctggcgg
ccgccgggatgggagcacgaccagcacctgcactgggaagtaaggccgtggttttatcat
gacggcggcgtaggcgggatcaccatcctgacggaagacgtaacggccaacgcaatgcac
caggaagaactgcaacaagccaaacagctggcggaacaggccagcgtggccaaatcggaa
ttcctggccaatatgagccatgagatcaggaccccgctgaatggtattatcgggtttact
gacctcgtactgaaaacacggctcaacgaagtgcagcatcaatacctctctatcgttaac
cagagcgccagtaccctcctgaatatcatcaacgatattctcgacttctcgaagatcgaa
gccggtaaactggaactggatatccagaaacaggacatcttcgaagtcagcagccaggtg
agcgacatggtaaagttccaggcgcagagcaaaggcctggaaatgatctatgacgtgtcc
gcggacctgccccggttcatctggactgaccagctgcggctgaaacaaatattggtcaac
ctcctttccaatgccgtcaaattcacggagaaaggggaggtcggcctgaagatttacccc
gtttcaccggcgaatgctgaactctatcgcaccattcgtttcgaggtctcagacaccggt
atcggcatccgcaaagagcggcaggaaaaaatctttgaagccttctcccaggaagatata
tccatcaccaaaagatatggtggcaccgggttgggccttaccatctccaacaagctgctg
gggttgatgaacagccggttgcaggtggaaagcatccccggtgaaggaagtactttcttt
tttgaaataaccgtggaaacagccgacggaccaccggtaacctggcagcatatcgaggcg
gtaaaaaaagtgctggtgacggatgataatgaacataaccgcaccatcctgcaacagatg
ctgttgctgaaaggtattgaaaccgacatggcccgcagtggctttgaagcactgcagctg
ctcatggaagggcgcacgtacgacgccgtgctgatggactatcacatgccggtgatggat
ggcctggaaacactccgtaaaatgcggcagatggccgaccagctgggtacctggacgccg
gtcgtattgttgtacagctcttcagatgatgaaacggtacaacgggtatgtgaagaactg
aaagtggaacaacggctggtgaaacccgttaaaatgcaggacctgtacaacgcactggca
cacctgtcattgaaaaattccgatcagaccgatattgcaggggcaacaacccaaaagctg
caaccggagcgcacgtcgttaaaagtattgctggcggaagacaatagcgtcaatatgctg
ttgattaaagccatcattacccggtctgtgcccatggctaccattgtggaggcaaaaacc
ggcctggaagcggtggagctctatatgagcgaacaaccggacctcgtgttcatggacata
cagatgcccgaaatggacgggtatgatgccacccgtcgtatccgggaactgtttccggag
aaacatactcccattgtggcactcactgccggcaacaccaaaggcgaacgcgaaagatgc
atcgccgccgggatggatgactttctctccaagcctttcgtggaagatgaaatactcgcg
ctggtcaacaaatgggggacgggtgacgaaccggccgggatagaagctgcaggcgtccgg
ccactggacctttccgtgctcatgggctacctgggcagcgatacaaaacaagacccgttg
ctgcgcgaaacactctccctgttgctgggggactgtaaatcagtgaaagcggaaataacg
ggacaggacatgagccagcatcccaaaaggatcagggagatatgccacagtatgcggagt
gtaaccacctacgcaggtttgacagggctggaaaaagcaatccgggacacagagacgaac
ggtgttacaacggaacagctgcaggtattggcaacagagctggataaagctattgtagcg
gtgcagctggcgctggaccagctgccctga
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