Chitinophaga oryzae: HF329_15630
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Entry
HF329_15630 CDS
T07451
Name
(GenBank) response regulator
Organism
coy
Chitinophaga oryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reg_prop
HATPase_c
Response_reg
HTH_18
Y_Y_Y
HTH_AraC
HisKA
SGL
DUF5074
HATPase_c_5
HATPase_c_3
PKD
HATPase_c_2
KIP1
Allexi_40kDa
Motif
Other DBs
NCBI-ProteinID:
QJB36136
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Position
4103658..4107527
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AA seq
1289 aa
AA seq
DB search
MSHNAGLSIAQDQQGFVWVGTHYGLNRYDGFRFKIYRHHADDSTSLPDNQIMTLYRDCHN
TLWVGTTGGLARYDPVHDRFERIPLEPAPRRTNINCIYVDSKNRRWVGANNGLFLQDGKR
LVQLTPGKIAGYVVKCVYEDRHGNIWIGTNKGLTRMTGDRYETFRHEDGQTNGLAMNFIT
AITEDRSGKLWIATQTGGINIYDPSTGRFSLLAQPAIINNIVRRIVPDKAGNMWIGTQEG
LSIVDPVTLRGRHYQQEPHNNNSLSQNSIHSIYEDNNGTFWIGTYFGGVNMVRPDGSSFK
AWQQHPPLDGISNNVISSIHEDARHNYWIGTEGGGLNYYDRSTGRFTYYKHDVNNPASLG
SNLVKVVYEDKDHHIWTGTHGGGLNLLQHGGFRRYFYNPKDPATFSGEVTSVLEDSRGRF
WVGTNVQLYLLHRNGVELEQQADTALMGVAKRQSIRCIVEDSRRRILVGTISGLYVLEGD
TARVLQQGYINSIREDSQHNIWVSMYFGGLIKYNAALERQRHYTEKDGLPNDNVLGLLED
DQHYLWISTHNGLTRLDPARHRFQTYTVSDGIAGNVFNYNSFLRDSRGEFLFGGYNGITS
FFPEKIITNTYPAPIRFTGLRLFNNPVGIAQKDQLLKEDISYTKALRFRHNQDVFTLEFA
LLNYIKSSKNRYAYRLEGGDGNWIETTNPAVTYTNLSSGHYTFWVKGANNDGIWSEPAKM
EITILPPFWLTWWAFTIYAMCIGLLIFFVARFFFLWALLHKEEELHQVKLNFFTHVSHEI
RTHLTLLLVPVEKMIDTLKKDDPLQATLTQLRNNADRLLKLVNELMDFRKAETNHLKLQV
QEQDLIPFLDQIYSSFRELSLDRHISMAFRHDTEHAQVYFDREQLEKVFFNLLTNAFKFT
PDGGSIQLHVSQVRQNIVVTVTDNGRGIAPEYLDKLFTNFFQVQDHGQQNTGYGIGLALS
KNIVEQHKGTLTVESEPSAAGSQGRTCFTVTLPLGVRHFEGTQHVVGGEPAMPAAPLKMP
LPSEETEADAAASPQPFTILIVEDNPELRALIRQTFQHQYQVLESENGAAGLAIATAQIP
DMVISDVMMPEMDGLQFCTALKTDERTSHIPVVLLTAKSSQADHVSGLETGADLYLTKPF
STRVLALNVRNLIASREKMRERYSRQLQAEAVIPDPLPNSLDNAFLEKVMALVEEHMDDP
EFGVEMLARKVAMSQPVLYKKLKAVTNMSVNDFVKSLRLKKAAALIRTRQHTVYQVAYMV
GYNDRKYFSREFKKQFGKTPSEFAEAPEL
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
ctgtctcataacgcagggctgtcgatcgcacaggaccagcagggcttcgtctgggtaggc
acccattatggcctcaaccggtacgacggtttccgttttaagatataccgtcaccatgcg
gatgacagcacctcgctgcccgacaaccagatcatgaccctgtaccgcgactgccacaac
accctctgggtggggaccaccggcggactggccagatatgacccggtacacgaccgcttc
gaacggataccactggagcccgccccccgccgtaccaatatcaactgtatttatgtagac
agtaagaaccgtcgctgggtgggcgccaacaacgggcttttcctgcaagacgggaaacgg
ctggtacagctgacgccgggaaaaatcgccggttatgtggttaaatgcgtgtacgaagac
cgccacggcaatatctggatcggtaccaacaaaggcctcaccagaatgaccggcgaccgg
tacgagactttccggcatgaagacggacaaacgaacggccttgcgatgaatttcatcacc
gctatcacggaagaccgttccggtaaattgtggatcgccacccaaaccggtggtattaat
atatatgatccttcaacgggccgtttttcgctgctggcccagccggccattatcaacaat
atcgtccgcaggatcgttcccgacaaagccggcaatatgtggatcggcacccaggaaggc
cttagcatcgtcgatccggtgacgctgcgcggacgccactaccagcaggagcctcacaac
aataacagccttagccagaattccatccacagtatttatgaagacaacaacggcaccttc
tggatcggtacctacttcggcggcgtgaacatggtgcggcctgacggcagctcttttaaa
gcctggcagcagcatcccccgctggacggtatcagcaacaacgtgatcagcagcatccat
gaagatgcccgccataattactggataggcacggaaggcggcggccttaattattacgac
cgcagcaccggccgcttcacttattataaacatgatgtcaataatcccgcgagcctcggt
tccaacctggtgaaagtagtctatgaagataaagatcaccacatctggaccggcacccac
ggcggcggcctgaacctgttgcagcacggcggcttccggcgctatttctataaccccaaa
gatcccgctaccttttcgggggaagtgacctccgtgctggaagacagccggggcaggttc
tgggtgggcaccaatgtgcagctctacctgttgcaccgcaacggcgtggaactggagcaa
caggcagataccgcgctgatgggcgttgccaaacggcagtccatccgttgtatcgtggaa
gacagccgccggcgtatcctggtggggaccattagcggcttgtatgtgctggaaggcgat
accgcacgggtattgcaacaggggtatatcaactccatccgggaagactcccaacacaat
atctgggtgagcatgtatttcggcgggctgataaaatacaatgcagccctggagcgccaa
cggcattacacggaaaaagacggtctgccgaacgacaacgtactggggctcctggaagac
gaccagcattatctgtggatcagcacccataacgggctgacacgcctggaccccgcccgc
caccggttccagacctatactgtcagcgacggtatcgccggcaacgtgttcaactacaac
tcctttctgcgtgacagccgcggggagttccttttcggcggatacaacggcatcaccagt
ttcttccccgaaaaaatcatcaccaatacctatcccgccccgatccgttttacaggcctg
cgtttgttcaacaacccggtgggcatcgcccaaaaagatcagttgctgaaagaagatatc
agttacacgaaagcgctgcgcttccgtcataaccaggatgtgtttacgctggaattcgcg
ttgctcaactatatcaagagcagcaaaaaccgctacgcctaccggctggaaggtggcgac
ggcaactggatagagaccaccaacccggcagtcacctacactaacctgtcgtccggtcat
tatactttctgggtaaagggcgccaacaacgatggtatctggagcgagccggccaaaatg
gagataaccatcctgccgcctttctggcttacatggtgggctttcaccatctacgccatg
tgtatcggcctgctgattttctttgttgcccgcttctttttcctctgggccctgctgcat
aaggaagaagagctgcaccaggtgaaactgaatttcttcacccatgtgtcgcatgagatc
aggacgcacctgacgctgttgctggtgccggtagagaaaatgatagatacgctgaagaaa
gacgacccgctgcaggccacgctgacacagctacgcaacaatgccgaccggctgctgaag
ctggtgaatgagctgatggatttccgcaaggcggaaaccaaccacctgaagctgcaggta
caggaacaggacctgatccctttcctcgaccagatctacagcagtttccgggagctgtcg
ctggaccgccatatcagcatggctttccggcatgacacagaacacgcgcaggtgtacttc
gaccgggaacagctggaaaaagtgtttttcaacctgctgaccaacgctttcaaattcacg
cccgacggcggcagcatacaactgcatgtatcgcaggtacggcaaaacatagtcgttacc
gttaccgacaatggccgcggtatcgcccccgaatacctggacaaactgtttaccaatttc
ttccaggtgcaggaccacggtcagcagaatacgggttacggtatcgggctggcgctgtcc
aaaaatattgtggagcagcacaaaggcacgctgacggtggaaagcgaaccttcggccgcg
ggcagccagggccgtacctgctttaccgttaccctgccgctgggcgtccggcattttgaa
ggtacgcagcacgttgtaggcggcgagccggccatgcccgccgcaccgctgaaaatgccg
ctgccttccgaagaaacggaggccgatgccgccgccagtccgcagccttttaccatcctc
atcgtggaagacaatcccgagctgcgcgcccttatccgtcagaccttccagcaccagtac
caggtactggaaagtgaaaacggggccgccggtttggcgatcgccactgcccagatcccg
gatatggtgatcagcgatgtgatgatgccggaaatggacgggctgcagttctgtaccgct
cttaaaaccgatgagcgtaccagtcatatcccggtggtgctgctcaccgccaaaagttca
caagccgatcatgtgagcggcctcgaaaccggcgccgacctctatcttaccaaacctttc
agcacgcgggtgctggcgctgaatgtccgtaacctcatcgcttcccgtgaaaagatgcgg
gaacgttacagccggcagctgcaggcagaggctgtcatccccgacccgctgcccaacagc
ctggacaatgctttcctggagaaagtgatggccctcgtggaagagcatatggacgatccc
gaatttggcgtagagatgctggcccgcaaggtcgccatgagccagccggtgttatataag
aagctgaaagccgtaacgaacatgtcggtgaacgattttgtgaagtcgctgcgcctcaaa
aaagccgcggcattaatccgtacccgtcagcataccgtttaccaggttgcttatatggta
ggatataacgaccgtaaatatttcagccgcgaattcaaaaaacagttcgggaaaacacct
tccgagttcgcggaagctcctgaattgtga
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