Chitinophaga oryzae: HF329_18190
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Entry
HF329_18190 CDS
T07451
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
coy
Chitinophaga oryzae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
HTH_8
AAA
Mg_chelatase
MCM
AAA_2
AAA_16
AAA_19
AAA_22
ATPase
IstB_IS21
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QJB33141
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Position
4811116..4812483
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AA seq
455 aa
AA seq
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MADKEKILIVEDEFIVGNDLKMILVKGGYDVCGIAASVEQARLLISQQKPDWVLLDIILK
TPTSGIELAKELQQLRIPFLYISANTNQQTLEAAKATQPYGFLVKPFRERDLFVMLDIAR
YRYGAETGIIREERQPAAAATVLDPNIIGSSSSMKKAQEQAGIVAPTNTSVLLLGESGTG
KERFAQAIHKNSHRKNKPFITVNCAALPVSLLESELFGHERGAFTGAVQKRAGKFEQAHG
GTLFLDEIGELPLEAQVKLLRTLQEKEIEKLGGGPLIKVDVRVIAATNRNLEKEVAEGRF
RLDLYYRLNVFPIALPPLREHKEDITPLTLHFLKKFSTNAGRKMTGISDAALQTLLQHDW
PGNIRELEHVIERHFILAEGEQINTINIPVAQLPVLAAEEKLETMEEMERAHILKVLKAC
NGRVSGSMGAAAILRISAQTLYSKMKKLGIKTTYK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaagaaaaaatactgatcgtcgaagatgaattcattgtaggcaacgacctg
aaaatgatactggtcaaaggcggctacgatgtatgcgggatcgcggcgtctgtagaacaa
gcccggttattgatctcacagcagaagcccgactgggtactgctggatatcattctcaaa
acgccgaccagcggcattgagctggcgaaagaacttcagcagctccgtatcccttttctg
tatatttccgccaataccaaccagcaaacgctggaagccgccaaagcaacccaaccctat
ggtttcctggtaaaacctttccgggaaagagacctttttgtgatgctcgacatcgcccgt
taccgctacggcgcagaaacagggataataagagaagaacggcagccagcggccgcggca
acggtcctcgatccgaacattatcggcagcagcagcagcatgaaaaaagcacaggaacag
gccggaatcgttgccccaaccaatacttccgttttgcttctgggagaaagcggcaccggc
aaagaacgttttgcgcaggctatccacaaaaactcccacagaaaaaacaaaccttttatt
acagtcaactgtgcagcgttgccggtttccctgctggaatcagagctgttcggccatgaa
cgcggagcctttacgggcgccgtccaaaagcgcgccggtaaatttgaacaggcgcacggc
ggcaccctttttctggacgaaatcggtgaactgccattggaagcgcaggtgaaactgctt
cgcaccctgcaggaaaaagaaatagaaaaactgggcggaggcccgctgatcaaggtagat
gttcgcgtcatcgccgctacgaacagaaacctggagaaagaagttgccgaaggaagattc
cggctcgacttatactaccggctcaacgtatttcccattgcgttacccccactgcgcgag
cacaaagaagatattacgccgctgacccttcattttctaaaaaagttctccaccaatgcc
ggcagaaaaatgaccggcatcagcgacgcagcgctgcaaacgctactgcaacatgactgg
cccggcaatatccgtgagctggaacatgtgatagaacgacattttatcctggcagaggga
gaacagatcaacaccataaacatccccgtcgcccagctgccggtccttgctgccgaagaa
aaactggaaacgatggaagagatggaaagagcccatatcctgaaagtgctgaaagcctgc
aacggccgcgtatccggcagcatgggcgccgccgccattctccgcatatcagcgcagacg
ctgtactcgaaaatgaaaaaactgggtataaaaaccacttacaaataa
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