Chitinophaga oryzae: HF329_29490
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Entry
HF329_29490 CDS
T07451
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
coy
Chitinophaga oryzae
Pathway
coy03030
DNA replication
coy03430
Mismatch repair
coy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF329_29490
03430 Mismatch repair
HF329_29490
03440 Homologous recombination
HF329_29490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coy03032
]
HF329_29490
03400 DNA repair and recombination proteins [BR:
coy03400
]
HF329_29490
Enzymes [BR:
coy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF329_29490
DNA replication proteins [BR:
coy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF329_29490
DNA repair and recombination proteins [BR:
coy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF329_29490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_14
AAA_22
RuvB_N
AAA_5
AAA_24
Rad17
AAA_30
AAA_2
AAA_7
AAA_18
AAA_19
NTPase_1
DNA_pol3_delta
nSTAND3
Mg_chelatase
RNA_helicase
Sigma54_activ_2
AAA_16
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QJB35214
LinkDB
All DBs
Position
complement(7525854..7527872)
Genome browser
AA seq
672 aa
AA seq
DB search
MENFIVSARKYRPQNFSTVVGQAHITTTLKNAIRNNQLAHAFLFCGPRGVGKTTCARILA
KTINCENLQPDGEACNECHSCKSFNEGSSFNIHELDAASNNSVDDIRTLVEQVRFSPQAG
KYKIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRI
TIQDTVDHLKEICEKEHIQADADALHLVAQKTDGCMRDSLSTLDKIVSFTSGHLTYQNTL
EHLNILDYDYFFRIMDTVLQQDVSTALLIFDEILQKGFEGDNFLNGWAEFLRNLLLSKEE
KAFHLVEVSGNLKDRYKQLSGKISPAYLITALHLLNETEINYRLARNKRLHVEMALIKLC
YLQQAVSLVSDDNNGEVLKKKLVADGTPPQRLRAPGPQPAAAKPATTASIVAQSPETARL
TVDSTPAAAVQAQAPAPAAGNPGQAANTAAAGMNTGAPAGHPANGASASSTPISDNTAAP
ARPAPAAAGAAPVATPNTQATAYATGSQAGAATAAKPAAPASKLTGLAAMKEALAAKQQT
NAQVQSIPLTAGALEVYWEEFIDRFRQANKMTVVSNLALAVLKLLGATEIGIVSRNIVQH
RFMEEEKMAISEFFKQKFSNPTLVLTLQLDESQQVQDLGPAPLSSREQFQHMSEKYPLVK
ELKDRLNMELDF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttatcgtttcagcccgtaaataccgtccacagaacttttcaacagttgta
ggacaagcacatatcaccaccacgctcaagaatgccatccgcaataatcagctggcgcac
gctttcctgttctgcgggccacgcggagtagggaaaaccacctgtgcccgtattctggct
aaaaccattaactgtgagaacctccagccggacggggaagcctgtaatgaatgtcattcc
tgtaaatccttcaacgagggcagttccttcaacatccatgagctggatgccgcttccaac
aactcggtagacgatatccggacgttggtggagcaggtccgtttttcgccacaggccggc
aaatacaagatctatatcatagatgaggtgcacatgctgagttcatctgccttcaatgcg
ttcctgaaaacgctggaggagccgccttcctatgcgatctttatcctggccaccacggag
aagcacaagatattaccgacgattctcagccggtgccagatatttgactttaaacgtatt
accatacaggatacggtagaccacctgaaagagatctgtgagaaagagcatatccaggca
gatgccgacgcccttcacctggtagcccagaaaacggacggctgcatgcgcgattcgctg
agcacgctggacaaaatcgtgagttttaccagcgggcaccttacctatcagaatacgctg
gagcacctgaacatcctggattacgattatttcttccggatcatggacaccgtgttacag
caggacgtgtctaccgcgctgttaatatttgatgaaattttacagaaagggtttgagggg
gacaacttcctgaacggctgggccgaattcctgcgcaacctgttgctcagtaaggaggag
aaagcttttcacctggtagaagtgtccggcaacctgaaagaccggtataaacaattatcc
ggtaaaatcagcccggcttacctgattaccgcccttcacctgctcaatgagacggagatc
aactaccggttggcccgcaacaaacgcctgcatgtggagatggcgctgatcaagctttgt
tacctgcagcaggctgtcagcctcgtgagtgacgataacaacggagaggtattaaaaaaa
aagctggtagctgacggcacgccaccacagcggttaagagccccgggcccgcagcccgca
gccgccaaaccggctaccactgccagtatagtggcccaatcgcccgaaacggcgcggctg
actgtagacagcactcctgcagctgctgttcaggcccaggcgccagcgccggccgcgggc
aatcccggccaggcagcgaacaccgccgctgccgggatgaataccggagcgcctgccggg
catccggccaacggcgcatctgccagcagtactcctatttctgataacacggccgcacct
gcccgtcctgctccggcagccgctggcgctgcgcccgtggccacgccaaacacacaggcg
acggcatatgccaccggcagtcaggctggcgccgccacagccgccaaaccagccgcgccg
gccagcaagctgaccgggctggcagcgatgaaagaagcgctggccgccaaacagcagacg
aatgcgcaggtacagagcattccgctgacagcaggcgccctggaagtttactgggaggag
ttcattgaccggttccgccaggccaacaaaatgaccgtggtgagcaacctggcgctggca
gtattgaaattgctgggtgcgaccgagataggcattgtgagccgcaacattgtgcagcac
cggtttatggaagaggagaaaatggcgatttccgagtttttcaagcagaaattcagtaat
ccgacccttgtgctgacccttcagctggacgagagccagcaggtacaggacctgggaccg
gcgccgctctccagcagggaacaattccagcatatgtcggagaaatatccgctggtaaaa
gagttaaaagaccggcttaatatggagctggatttttaa
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