Carica papaya (papaya): 110808440
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Entry
110808440 CDS
T05151
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4-like isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110808440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110808440
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110808440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
110808440
NCBI-ProteinID:
XP_021889627
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMIEYRCSSIHWKPSPVVALATSADDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDP
NSRVSSLVWCRAGSKGLPCGRLFSSSIDGSVSEWDLFHLKQKIVLESIGVSIWQMAVAPT
NDQLVYAEPKVQHIGNGFLNGNSDDKEDGETSGSESDSDVEDLHKQSVILDRHVAIACDD
GCVRIYTIPDSNELIYQRSLPRVSGRVLSVTWSSDANMIYSGSSDGLIRCWDAKLGHEIY
RITVGLGGLGGGPELYVWSLLSLRCGTLVSGDSTGSVQFWDSKHGTLLQAHSNHKGDVNA
LAAAPSHNRVFSAGSDGQVILYKLSSEMVGSGDDNSSAEVTKKWVYIGYVRSHTHDIRAL
TVAVPIIREADPLPEEELPDKKSKRSRSERCKEKPIDFTYHKWAHLGVPMLISGGDDTKL
FAYSAQEFTRFSPHDICPAPQRVPIELVHNTIFCQTSLLLVQASCWIDILRVSVKNNSAG
RAATDLLARVKSKASRRIICSTISKSGAFFAYSDQIRPSLFELKRNEFGESKWTVTRRQL
PPKLPFAHSMVFSSDCSRLMIAGHDRRIYVVDVGSSELVHTFIPCRDEHEEELQPSEPPI
TKMFTSSDGQWLAAINCFGDVYVFNLEIQRQHWFISRLGGASVTTGGFHPWNNNVLIIST
SSNHVFVLDVEAKQLGEWSMQHSYVLPKRYQEFPGEVIGITFSPSPSSSAIIYSARAKCL
IDFGMPVERDDENDLVNGCVTKKLQNALLKGGLRCGNGTRKRALEDCQTELKLSGRRNFE
VLPSKNPVLFIGHLSKNSVLVIDKPWMEVVKSLDTQPVHRNIFGS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgagtaccgttgtagctcaatccattggaagccgtcaccggtagttgcccta
gccaccagtgccgacgactctcaggtcgctgccgctcgagaggacggctcgttggagatt
tggctcgtctctcccggcgccgtaggctggcactgtcaacttactattcatggagatcct
aattcgagagtttcatcgcttgtgtggtgccgtgctggctcgaaagggttgccatgtggt
cggttgttttcttccagcatcgacgggtcagtttcagagtgggatctcttccacttgaag
cagaagattgtgctagagtcaattggcgtttcaatctggcagatggctgtcgcacccact
aatgatcaactggtttatgcagaacctaaggttcaacatattggcaacggatttttaaat
ggtaactctgatgataaagaagacggtgaaaccagtgggagtgagagtgattctgacgta
gaagatcttcacaagcagtcagttattttggataggcatgttgccattgcttgtgatgat
ggttgtgtaaggatttatactatccctgattccaatgagttgatataccaaagatcattg
cctagggtcagtgggcgtgttctaagtgtgacttggagttctgatgcgaatatgatctac
tcaggaagtagtgatgggttgataagatgttgggatgcaaaactgggtcacgaaatttat
agaattacagttggacttggaggtttgggtggtggacctgaactctatgtgtggtcattg
ctttcattgaggtgtgggactcttgttagtggagacagtaccggcagcgttcagttttgg
gacagcaagcatggaactcttctgcaggcacattctaatcacaagggtgatgtgaatgct
cttgcagctgctcctagtcacaacagagttttctctgctggttctgatggacaggttatt
ctttataagctctctagcgagatggttggttctggcgatgacaattcttctgctgaggtg
acaaaaaaatgggtatatattggttatgtaagatctcacacgcatgatatcagggccttg
acggtggcagtgccaattatccgtgaagcagatcctctgccagaggaagagttgccagat
aaaaagtcaaaaagaagtcgtagcgagcgctgtaaggagaagcccattgactttacgtat
cataagtgggctcacctaggagttccaatgcttatctcaggtggtgatgacacgaagctt
tttgcctattctgctcaggagttcactaggttctctccgcatgatatctgtcctgcacct
cagagagttcctatagaactggtgcataatacaatattttgtcagacttctttgcttctg
gtccaagcttcttgctggatagatattctccgtgttagcgttaaaaataattctgcaggc
cgggcagcaactgatttgttggctcgggttaagagtaaggcttctcggaggatcatttgc
agtacaatttctaagtctggagcattttttgcctattccgaccaaattagacccagctta
tttgaattgaagagaaatgaatttggggagagtaagtggactgttactaggaggcagctt
cctccaaaactaccatttgcacattctatggtttttagttctgattgttcgcgtttgatg
atagcaggacatgatagaagaatatatgttgttgatgtgggaagttcagaactcgtccat
accttcataccttgcagggacgagcatgaagaggaattacaacctagtgaacctccgata
acaaaaatgttcacaagttctgatgggcagtggttagctgctatcaactgctttggagat
gtctatgtgttcaatcttgagatacaaaggcaacactggttcatatcaagattgggtggt
gcctctgttacaactggtggtttccatccctggaataacaatgttcttataatttcaacc
tcctcaaaccatgtctttgtgcttgatgttgaagctaaacaattgggggaatggtcgatg
cagcattcttatgttctgccaaagagataccaagaatttcctggggaggttattgggatc
acattctcgccttccccaagttcatctgctataatttatagcgccagggcaaagtgcttg
attgactttggaatgccagttgaacgggatgatgaaaatgacttggtaaatggctgcgta
accaagaaattgcaaaatgccctccttaaagggggtctaaggtgtgggaatgggactcga
aaacgggctctggaggactgtcagacagaattgaaactaagtggtagaaggaattttgaa
gttttgccttccaaaaaccctgttttatttattggacacctttcaaaaaattccgtcttg
gtcatagacaaaccatggatggaagtggttaaatctttggatactcaacctgttcacaga
aatatttttgggtcataa
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