KEGG   Carica papaya (papaya): 110808928
Entry
110808928         CDS       T05151                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110808928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110808928
   03041 Spliceosome [BR:cpap03041]
    110808928
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110808928
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110808928
Spliceosome [BR:cpap03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110808928
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 110808928
NCBI-ProteinID: XP_021890259
LinkDB
Position
Unknown
AA seq 429 aa
MDLAKKRKLDENGVGSYNDGDSSPNLLTPQDARKVIERLSTDQLLDILQDAVVRHSDVLE
AVRSVADADPAQRKLFIRGLGWDTTTDNLRALFSAYGELEEAVVILDKTTGKSKGYGFVT
FKHVDGALLALKEPSKKIDGRVTVTQLAAAGNTGSNSNAPDVSLRKIYVANVPFDMPADK
LLSHFLSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEGAQAALVDPVKTLDGRQLQCKLA
IDGKKGKPGGPTGQDGTVQAGGPGVGGAGHVHGDGMGMAHPPGSYGGPGGPGGLGNYGGF
SGGPPPLGHMNSSLGGQAPSSLGAAGSAGGYGGAVIGGPYGGYSGPGSTGYGGLGVAGVA
AGAGGGLAAAASGLYRMPPSSMPGGYPDSGHYSLSSATAFPGQHHQATGTSPVPRVPPGG
MYPNMPPYY
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggatctagccaagaagcgaaagctcgacgaaaacggcgtcggatcttataacgatggc
gattcctctcccaatctcctcaccccgcaagacgctcggaaggtcatcgagcgtttgtcc
accgaccaactcctggatattctgcaggatgctgtcgtgcgtcactctgatgttctagaa
gctgttcgatctgtagctgatgctgaccctgctcagcgcaagctttttatccgcggtctt
ggctgggacaccactaccgataatctgcgggcgctcttttcggcgtacggagaactcgag
gaggccgtcgttattctcgataagactaccggaaagtccaagggctatggattcgttact
ttcaagcatgtagacggtgctctcctcgccttgaaggagccgtccaagaagatcgacggg
cgcgttactgttacacagcttgcagccgccggaaacacggggtccaattcgaatgctcct
gacgtgtcattaaggaagatctatgtagccaacgtaccttttgatatgccggctgataag
ctacttagccacttcttgtcgtacggtgagatcgaggagggaccattgggttttgataag
cagacgggtaagtcgaggggatttgcgctgttcgtatataagactgcggaaggtgcgcag
gcggctctggttgatccagtcaagacgttagatggcaggcagctgcagtgcaagcttgct
atcgatggaaagaaagggaaacccggtgggccgacaggtcaggatgggacggttcaggcg
ggtgggccgggtgttggaggagctggacacgtccatggagatggaatgggtatggcgcat
cctcctggttcctatggtggtcctggaggccccggtgggttaggaaattatggtgggttt
tcaggtggcccgccccccctggggcacatgaactcgtcgctgggtggacaagcaccgtct
tccttaggtgctgctggtagtgcaggtggatatgggggcgccgtgattggtggaccatat
ggtggttatagtggaccaggttctacaggctatggcgggcttggtgttgctggtgttgcc
gctggtgctggtggtgggttggctgctgctgctagtggattgtacaggatgccccctagc
tcgatgcctggtgggtatccggatagcgggcactatagtttgtcctcagctactgcattt
ccaggtcagcatcaccaagcaacaggaacttcgcctgtaccaagggttcctcccggtgga
atgtacccaaatatgccgccttattactga

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