Carica papaya (papaya): 110809498
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Entry
110809498 CDS
T05151
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110809498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110809498
Spliceosome [BR:
cpap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110809498
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
PRP4
ANAPC4_WD40
eIF2A
WD40_like
Endonuc-MspI
Motif
Other DBs
NCBI-GeneID:
110809498
NCBI-ProteinID:
XP_021891047
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MEVDEENPASIPATEASDAVLEGTTMDVDATQVQPVQPVIPPLPPPPVVLQPVAPISAIP
PPVIPLAPLPVRPSVLKPPVSQNGEVKMSDSDSDLEDAARSTGEYEISEESRLVRERQEK
AMQELLMKRHAAALAVPTNDMSVRTRLRRLGEPVTLFGEREMERRDRLRMIMAKLDAGGQ
LEKLMKAHEEEETAASVTAEEAEEEILQYPFYTLGSKELQDARVDIAKYSIVRAAMRLQR
VNRKRDDPDEDMDAEMDWAVKQVGNMALHCSEIGDDRPLSGCSFSHNGRLLATCSLSGVA
KLWNMPQVNMVSTLKEHKERATDVAFSPVNNCLATASADCTARLWNTDGTLLNTFEGHLD
RLARIAFHPSGKYLGTTSFDKTWRLWDVNTGAELLLQEGHSRSIYGIAFHHDGSLAASCG
LDALARVWDLRSGRSILAFEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKRSSLYI
IPAHSNLISQVKYEPQEGYFLVTAAYDMTVKVWSGRDFKLIKALSGHEAKVTSLDITGDS
SYIATVSHDRTIKLWTSNGGTFSM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgacgaggaaaatccggcgtcaatccctgcgacagaagcttcagatgcagtc
cttgaagggacaactatggatgttgatgccactcaagttcagccagtccaacctgtcatt
ccaccgttacctccacctccagttgttctgcaacctgttgctccaatatctgcaattcct
cctcctgttatcccattggcacctctccctgttcgcccttctgttcttaaaccacctgtc
tcacaaaatggtgaggtcaaaatgagtgactcagactccgatcttgaagatgcagctaga
agcaccggagaatatgagatttctgaagagagtagactggtgagggaaaggcaggaaaag
gcaatgcaagaattgttgatgaagcgacatgctgctgctctagcagttcccaccaatgac
atgtctgttagaactcgacttcggaggcttggggaacctgtaaccctttttggagaacgg
gagatggaaagaagagacaggttacggatgattatggccaagctggatgccgggggtcag
ttggagaagctgatgaaagctcatgaagaggaggaaacagcagcttctgttacagcagag
gaagctgaggaagaaattcttcagtatcccttttacactctgggttcaaaagagcttcag
gatgccagagttgatattgcaaaatactccattgtaagggcagccatgcgtcttcaacgt
gtaaataggaaaagggatgatccagatgaggatatggatgcagagatggactgggctgtg
aagcaggtgggaaatatggccctccattgcagtgagattggggatgatagaccactttct
gggtgttccttttcgcacaatggaagacttcttgccacctgttctttgagtggagttgct
aagttgtggaacatgccccaagtaaacatggtttccaccttaaaggagcacaaagaacgg
gcaactgatgttgctttttctcctgtaaacaattgtttagccactgcttcagctgactgt
actgcaaggttgtggaatactgatggaactctcttgaatacatttgagggacatctggat
cgacttgcacgcattgccttccatccatcaggcaaatatcttggcacaacaagctttgat
aagacatggagattatgggatgtaaatactggtgcagaattgcttcttcaggaagggcat
agtcggagcatttatgggattgccttccaccatgatggatccttggcagcatcttgtgga
ctcgatgcacttgcacgtgtttgggatctccgtagtgggaggagtattcttgcatttgaa
ggccatgttaagccagttctaggagtaagtttttcacctaatggctatcatttggccact
ggtggtgaagataatacttgtcgcatatgggatctaaggaagcgaagttctttatacatt
ataccagcacattctaacctcatttcacaggtgaagtatgagcctcaggaaggatacttc
ttagtgactgcggcttatgacatgactgtaaaggtttggtcagggcgagatttcaagctt
atcaaggctttatcaggacatgaagcaaaagtcacctcattggatattactggggatagc
agctacattgcaactgtctctcatgatcgaacaatcaagctctggacaagcaatggtggc
acattttcaatgtaa
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