Carica papaya (papaya): 110810117
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Entry
110810117 CDS
T05151
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110810117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110810117
03009 Ribosome biogenesis [BR:
cpap03009
]
110810117
Enzymes [BR:
cpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110810117
Spliceosome [BR:
cpap03041
]
Complex A
U1 snRNP components
U1 related factors
110810117
Complex B
110810117
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
Pre-60S particles
Helicases
110810117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110810117
NCBI-ProteinID:
XP_021891880
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MNPYDRRYADPNSYRQRRSDLVGPPPSMPPPSLAVCGGMGTAVAAVPYGRGGPLPYRGGG
PHPPFAGRGPVPATGHAYPTFQPPVGGFSIGRGERVANGHVGDRRGGRGGFSGRGREGVR
GSESGSRGREGYPGGGRGGGRGGSRGGSARGELDRVSLPRPEFGNLVPFEKNFYVESPSV
RAMSEHEAMMYRAKRDITVEGHDVPKPIRLFQEANFPDYVLEVIAKLGFREPTPIQAQGW
PMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQE
EAVKFGLRTNIKTTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLKRVTYL
VLDEADRMLDMGFEPQIRKVVSQIRPDRQTLYWSATWPREVESLARQFLRNPYKVIIGSS
DLKANQSINQVVEVVTDMEKYNRLINLLREVMDGSRILIFMETKKGCDQVTRQLRMDGWP
ALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVH
RIGRTGRAGARGTAFTFFTHANAKFARDLIKILQEAGQIVPPALSALARLGGSSFGGSGG
NFRSKGRGGGSFGNRGLISGSNAVPLGGKRPW
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacccctatgatcgcagatatgccgatcccaactcttaccgccagcgtcgcagcgat
ctagttggtccaccgccgtcgatgcctccaccttcgctggcagtgtgcggtgggatgggc
accgccgtcgctgcggttccttatggccgtggcggaccgcttccctacagaggcggaggc
cctcatcctccttttgcgggaagagggcctgtaccagctaccggccacgcgtacccgacg
ttccagccacctgttggcggttttagcatcggccgtggtgaacgtgtggccaatggtcac
gttggggacaggaggggtggtcgcggtggcttcagcggaagaggccgtgaaggtgtccga
ggttccgaatcgggctctagaggaagagaaggataccctggaggtggtcgaggtggtggt
agaggaggtagtcgtggtggttcggcgagaggggagttggaccgcgtgtctcttccgagg
ccggagttcgggaacttggttccttttgagaagaacttctatgttgaatctccttcagtt
cgtgcgatgtctgagcatgaagctatgatgtaccgtgccaagcgggatattacagttgaa
gggcatgatgttccaaagccaatccgcttgtttcaagaagcaaattttccggattatgtt
ctcgaagtaattgcaaaattgggttttcgtgagccaacaccaattcaggctcaaggatgg
ccaatggctcttaagggcagagatttgattggcatcgctgagactggctctgggaagaca
ttggcatatctgctaccagctttggtacacgttagtgcgcagcctcgtttggtgcaaggt
gagggccctattgtattagtattagcaccaacaagagagttggctgttcaaattcaagaa
gaagccgtgaagtttggattaagaactaatattaaaactacttgtatatatggcggtgct
cctaaaggaccacaaattcgtgatcttagacgaggtgttgaaattgtcattgccacccct
ggtcgactgattgatatgttggaagcccaacacacaaacttgaaaagagtgacttacctt
gtgttggacgaggcagatcgaatgttggatatgggatttgagcctcaaataaggaaagta
gtgtctcagatccgaccagacaggcagacattatactggagtgccacatggccaagggag
gttgaatctctagcaaggcaatttttacgcaatccatataaggtaatcattggatcatca
gatctgaaagcaaaccaatctattaaccaagttgttgaagttgtaactgacatggagaag
tacaataggctgataaatctgcttagagaagtgatggacgggagtcgaattctcatattt
atggaaacaaaaaaagggtgtgaccaagttacaaggcagctgaggatggatggatggcca
gctctgtccattcatggtgataaaaaccaggctgaaagagactgggtgttggctgaattt
aaaagtggcaggagccctataatgacggccactgatgtagctgcaaggggtcttgatgtg
aaggacataaaatgtgtgatcaactatgattttccatccagccttgaggattatgtccat
aggattggtcgaactggtcgtgcaggagctaggggaactgcctttaccttcttcacacat
gccaatgcaaagtttgctagggacctgatcaagatcctacaagaagcaggacagattgtc
cctccagcattatctgccttggctcggttaggaggttccagttttggaggatctggggga
aactttcggagcaaaggacgagggggagggagtttcgggaaccggggtctgatatcagga
tccaatgctgtcccccttggtggaaagaggccatggtag
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