Carica papaya (papaya): 110815974
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Entry
110815974 CDS
T05151
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110815974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110815974
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110815974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Utp13
NBCH_WD40
ANAPC4_WD40
Nup160
PROPPIN
Cytochrom_D1
DUF5111
DUF2795
Motif
Other DBs
NCBI-GeneID:
110815974
NCBI-ProteinID:
XP_021899650
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MASHSLKKNYRCVPSLQQFYSGGPFAVSSTGSFIACACGGDSIKIVDSSNASIKSTIDCD
SDTITALALSPNDKLLFSSGHSRQIRVWDLETLKCVRSWKGHDGPVMGMACHASGGLLAT
AGADRKVLVWDVDGGFCTHFFKGHKGVVSSIMFHPDPSKILLFSGSDDATIRVWDLLSKK
CLATLERHFSTVTALAVSEDGWTLLSAGRDKVVNLWDLHDYVFKTTIPTYEIIEAVCVIQ
SATHFASVFGLYNQKSKKKRSGSQPTYFITVGERGIVRIWKSEGAVCLYEQKSSDVTVSS
DNDESKRGFTAAAMLPLDQGLLCVTADQQFLFYSAVEDSEKDSKIILTKRLVGYNEDIID
MKFLGEEEKFLAVATNLEQIRVYELASMSCSYVLSGHTETVLSLDTSVSSSGRVRIVTGS
RDNTVRLWDSESRSCIGIGIGHTKPVEAVAFSKKLLNFFVSGSGDRTIKVWSLDGVSDDL
EQPIHLKTKATVAAHDKDMTSLAVAPNDSLVCSGSLTVKIWAISDGSCLKTFEGHTSTVL
RASFLTRGTQFVSSGADGLVKLWTVKTNECIATYDHHEGKVWALAVGKKTEMFATGGDDA
VVNLWYDSTASDKEEAFRKEEKGVLRSQELDNAVLDADYIKAIRIAFELHRPHKLFELLA
GLCRKGDADDHIVNAFQALEKEEFRLLLEYVREWNTKQKLCHVAQFVLFRIFSILPPTEI
VQVSIIYFLVIKYYNKNLFLEGKTNTSKAPRGCNPF
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacattcactgaagaagaactataggtgtgttccgtcgttgcagcaattctat
agtggtggccccttcgcggtctcctcaactggttcattcatcgcatgcgcttgcgggggg
gactccattaagatcgtcgactcgtccaatgcatcgatcaaatcaacaatcgactgcgat
tctgacaccattacggccttggctcttagtcctaatgacaagttgctcttctcttcggga
cacagcaggcaaattagagtctgggatttggagactttgaagtgtgtgcggtcgtggaag
ggccatgatggtcctgtgatgggcatggcttgtcatgcatctggaggattgcttgcaact
gctggagccgataggaaagtccttgtttgggatgttgatggtggcttctgcactcatttc
ttcaaaggtcataaaggggttgtgtctagtatcatgttccatcctgatccaagtaaaatt
cttcttttctctggaagtgatgatgcgactatcagagtctgggatcttctgtctaaaaaa
tgtcttgcaaccttagaaaggcacttctcaaccgtaactgctttggcagtatctgaagat
ggatggaccttgctcagtgctgggagagacaaggttgtaaatctttgggaccttcatgac
tatgtcttcaagacgacaattcctacatatgagattattgaagctgtgtgcgtaattcag
tctgcgactcattttgcctctgtttttggtttgtacaatcaaaagagtaagaagaaaaga
agtgggtcacaaccaacttattttatcacagttggtgagcgtggaattgtgcgcatatgg
aagtctgaaggtgcagtttgcctatatgaacaaaagtcctcggatgtaactgtcagttca
gacaatgatgagtccaagagaggcttcactgctgcagctatgttgcccttggatcaggga
ttgctttgcgtgactgctgatcagcagtttcttttttattccgcagtggaagattctgaa
aaggactcaaagataatattaaccaaaaggcttgttggatataatgaggatataattgat
atgaagtttcttggtgaggaggagaagtttcttgctgttgctacaaatctagagcagatt
cgagtttatgaacttgcatccatgtcatgttcatatgtattatcaggtcacactgaaact
gttctaagccttgatacatctgtatcaagttcaggaagagtacgtatagtaacaggaagt
agggacaatactgtaaggttgtgggattcagaaagcagatcttgcattggaattggcata
ggtcatacaaaacctgttgaagctgtagccttttcaaagaagctgctaaatttctttgtt
agtgggagtggggatcgtaccattaaggtatggagtcttgatggtgtctctgatgatctg
gagcaacccattcatttgaaaacaaaagcaactgtagcagcgcatgataaggatatgact
tctttggcagttgcaccaaatgacagtttagtttgtagtggatctctgactgtaaagata
tgggctatatctgatggttcatgtctaaaaacctttgaagggcacacatcaactgtatta
agggcatcatttcttacccgtggaacacaatttgtttcctctggtgcggatggtttggtc
aagttgtggacagtaaaaacaaatgagtgcattgctacatatgaccatcatgagggcaag
gtttgggccttagccgttgggaagaaaactgaaatgtttgctactggtggtgatgatgca
gtggtcaatttatggtatgattcaactgcttctgataaggaggaagcattccggaaagag
gaaaaaggggtcctgagaagtcaagaattggacaatgctgttttagatgctgattacatc
aaagccatacgaatagcttttgaactccacaggcctcataaactttttgagctattggct
gggctttgcaggaaaggagatgctgatgatcatatagtgaatgcattccaggctcttgag
aaagaagaatttcggctacttttagaatatgttcgagaatggaatacaaagcaaaaattg
tgtcatgtggcacagtttgtgctcttccgaattttcagtattctgcctccgacagaaatt
gttcaggtttcgataatttattttctggttattaaatattacaataagaatcttttttta
gagggcaaaacaaatactagtaaggcaccaagaggatgcaacccattttag
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