KEGG   Carica papaya (papaya): 110816436
Entry
110816436         CDS       T05151                                 
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110816436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110816436
Spliceosome [BR:cpap03041]
 Common components
  Common spliceosomal components
   SR proteins
    110816436
SSDB
Motif
Pfam: RRM_1 RNA_bind Nup35_RRM_2 Nup35_RRM RRM_5
Other DBs
NCBI-GeneID: 110816436
NCBI-ProteinID: XP_021900325
LinkDB
Position
Unknown
AA seq 362 aa
MRSIFCGNFEYDARQSDLERLFKKYGKVDRVDMKSGFAFVYMEDERDAEYAIRALDRAEF
GRKGRRLRVEWTKHERGIRRPGGGGSVGGGGGSAGGGGGGSRRSSGNMRPSKTLFVINFD
PYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYDTQEDASKALDATNMRFFTSLLIPTPK
KKRHDRRRSPSPYRRERGSPDYGRGSSRSPYRRERGSPDYGRDRSRSPYGRERGSPDYGR
GASRSPYRRENDGADRGRGSSRSPYRKERESPENGRGPSQSPYRRDKPSPDNARRSPYAR
EKSSPENGHGPSHSPYERERSSPENGGTRSLISAPETGASPYGGAESPMRKRYNSGSPGA
EE
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaggtccattttctgtggaaactttgagtatgatgcgcgtcagtctgatctggagaga
cttttcaaaaagtatgggaaggttgatagagtggatatgaagtctggttttgctttcgtc
tacatggaagatgaaagagatgctgagtatgctattcgagcacttgatcgtgcagaattt
ggtcgaaagggtcgtaggcttcgtgttgagtggacaaagcatgaacgtggcattagaagg
cctggtggtggtggtagtgttggtggtggtggtggtagtgctggtggtggtggggggggt
tcaagaagatcttcaggcaatatgagaccttcaaaaaccctgtttgtcattaactttgat
ccatatcatacaaggacaagggacttggaaaggcactttgagccatatggtaaaatagta
agtgtaagaatcagaaggaattttgcttttgtgcaatacgacacacaagaagatgcctcc
aaagccctggatgctacaaacatgaggttttttacttcactcctcatccccacccctaaa
aaaaaaaggcatgatcggaggcgatcccctagtccttacagacgagagaggggcagccct
gattatggtcgtggttctagtcgtagtccttacagaagagagaggggcagccctgattat
ggccgtgatcgcagccgaagtccatatggaagggagaggggcagccctgattatggccgt
ggtgccagccgtagcccttataggagagagaatgatggagctgatcgaggccgtggttct
agtcgaagtccttatagaaaggaacgtgaaagtcctgagaatggccgtggccctagtcag
agtccctataggagagacaaacctagtcctgacaatgcccgtcgcagtccatatgcaaga
gaaaagtcaagccctgagaatggccatggccctagccatagtccctatgaaagggaaagg
tctagcccagaaaatggaggtacccgaagtctaatttcagcgcctgagactggggcgagc
ccttatggtggtgctgaaagccctatgcgcaagagatataacagtggttctcctggagcc
gaggagtaa

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