Carica papaya (papaya): 110819276
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Entry
110819276 CDS
T05151
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpap04121
]
110819276
Enzymes [BR:
cpap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110819276
Ubiquitin system [BR:
cpap04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110819276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
PHD
zf-RING_UBOX
zf-C3HC4
zf-RING_2
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
110819276
NCBI-ProteinID:
XP_021904098
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MGRTKQAHPHRSGGLVVESDETTELKLGEHKSSGTELPEEGIVGIDKAFYVQAYRSGWVS
DQHLDISEVVLSNLNLKEGFCAYGMNENLYEDYKYSLRICVRNANQFVDRMKLGHWPVLS
SSDITLEFIHEGTKEDIETNPAILSGSFDGPDEGVTGLVHLVSLEFLTLRPVPGVNFSDI
MSSLRMRIEILKSAFDACESLLENTRQLWKKSMMNVMAWLRPEVMTSEARYGVLKSTQTE
FVLHPEREDVAANSRKRARFDVVQFYEAIKPSKTDPLLEDDIPDLLPVLRPYQRRAAYWM
VQQEKGDSGSFSNIQRNHFHFPLCIPVGFLDSSSKMFYNPFSGSVSLNPEYSSPFVFGGI
LADEMGMGKTVELLACIFSHQKSESEDGVLVDDLLPVTADHKASLKRLKRECVECACGAV
SESRKYKGLWVQCDICDAWQHADCVGYSPRGRAQKARESSNIQGDLKKRKKDAVQIILRE
GEHICQMCSELLQVTSSPVPSGATLIVCPAPILPQWHDEITRHTHSGSLKTFVYEGVRNN
SFSSVPMVDISELVSADIVLTTYDVLKEDLSHDSDRQDGDRHFLRFRKRYPVIPTTLTRI
FWWRVCLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLHGLLRFLKASPFN
VPRWWMEVIRDPYEKRDAGAMEFTHNFFKQIMWRSSKVQVADELQLPPQEECLSWLIFSP
IEEHFYQRQHETCLSCAREVIESFKDNIPKRGVPGCEWSPYDFIFSCISSFSFCCHPQVG
SSGLRSLQQSPMTMEEILMVLVNKTKVEGEEALRRLVVALNGLAAIAMIEKNFSQAAALY
KEALHITKEHSEDFRLDPLLNIHILHNLAEILPLVTDSPEQPPLAMQQYFGCSEMEIEND
KKLYRNAVKRQKIGEKGNSSFAVGAGNLPGHTCNDFENALKDERKCDYEQESLRIACEQL
KNKYLSAFSSKLCAAQQDFKKSFVQVSSAFSDRDKQPTVWWLEALHHAEQNRDFSNELIR
KIEESVSGTLKTSSSRIASRFRTVSGLKYHLQTGLDLLEGSRKTLLDRLLEIDQTMEEPK
VEDIERVRHCRNCQGIDDGSTCLHCEVDELFQDYEARLFRLTKSHGEMVISAEDAVDMQK
KNSALNRFFWHLSEPSKVSTSSSVGNKELKKRGVGEKVVVSKSPSELEVVLGVIKSCCKS
HLGREGMLAASKQLQTLEGMRKEYSHARSLATVQAQFLLAHDEIKMATTRLHLRENENDK
SIDAISPDELDSANAQNSGEKFTSLALLASIQGKLRYLKGLVQSKQKDAVKTSSDSLLNQ
EIATISTSVEQKSEYLSKAEEACPICHENLSKQKMVFQCGHVICCKCLFAMTEQRLICDT
QHKWLMCPVCRQHTDVRNIAYADDRQNRPCNSDLLHKVQGYEMSESSLTVQGSYGTKIEA
VTRRILWIKSTDPNAKVLVFSSWNDVLDVLEHAFTANDITYVRMKGGRKSQVAISKFRGQ
QSNVTECHKRKVQQEKAKSFQVLLLLIQHGANGLNLLEAQHVILVEPLLNPAAEAQAVSR
VHRIGQEHKTLVHRFIVKNTVEESIYKLNRSRNTSSFISGNTKNQDEPLLTLKEVESLFA
VVGNDEKASENLRDLPPSVAAARAAERRLRESNAR
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaacgaagcaagcccatccacatcgttctggtggtttagttgtagaaagtgac
gagactaccgaactaaaactgggtgaacataaatcatctggaactgaactaccagaggag
ggaattgttggcattgataaagcattttatgtccaagcatataggagcggttgggtttca
gatcagcaccttgatatatctgaagttgttctgagtaatttgaacctgaaagaaggattt
tgtgcttatggaatgaatgaaaatctttatgaagactataagtattccttaaggatttgt
gtccgcaatgccaaccagtttgttgatcgtatgaagctgggtcattggcctgtcttatct
tccagtgacataacattggaattcatacatgaaggcacaaaggaggacatagagaccaac
ccggctatcttgtccgggagttttgatggaccagatgaaggtgttacaggtcttgttcac
ttggtaagtttagagtttttgaccctgaggccagtccccggggtcaatttctcagacatt
atgtcgtctcttaggatgagaattgagatacttaagagtgcgtttgatgcttgtgagtca
cttcttgagaacacaagacaactatggaaaaagagtatgatgaatgtcatggcttggctt
cgcccggaggttatgacttctgaggcacggtatggagttcttaaatcaactcaaacagaa
tttgttttgcacccagagagagaagacgtggctgcaaactccagaaaacgtgctagattt
gatgttgttcagttttatgaagccataaagccatcaaaaacagatccattgcttgaagat
gacatacctgacctactccctgtgctaagaccatatcagcgacgtgcagcttattggatg
gtacagcaagagaaaggagattcgggaagctttagcaacattcaaagaaaccatttccat
tttccactttgtatccctgtgggttttcttgattcttcctcaaaaatgttctataatcca
ttcagtggaagtgtttcattgaatccagaatattcttcaccctttgtctttggtggtatt
cttgctgatgagatgggtatggggaaaactgttgaattgcttgcttgcatcttttcccat
cagaaatcagaatcagaagatggcgtgcttgtggatgatttacttccagttactgcagat
cacaaagctagtctaaaaaggttaaaaagggagtgtgtagagtgtgcatgtggagctgta
agtgaaagtcgtaaatataaaggattatgggtacagtgtgacatctgcgatgcttggcaa
catgcagattgtgttggttattctcctagaggaagagctcagaaagccagagaatcttca
aatatacaaggagatctaaaaaagagaaagaaagacgcagtgcagattattcttagagag
ggggaacatatttgccagatgtgttccgaactgctacaagttacttcatctcctgttccc
tcaggtgccactctaattgtatgtccagctcctatattgccccagtggcatgatgaaatt
acacgccatacacattcaggttctctaaaaacttttgtctatgaaggcgtgagaaacaat
tctttttcaagtgtacctatggtggacatcagtgaactggtcagtgctgacattgtgtta
acgacttatgatgttcttaaagaggacctgtctcacgactctgataggcaagatggtgat
cgacacttcctaagattccggaagaggtaccctgttattccaactactctgaccagaata
ttttggtggagagtttgtttggatgaggctcaaatggtggaaagcaatgctgctgcagcc
actgaaatggctttgcgattgtatgctaagcatcgttggtgcataactggcactcctata
caaagaaagcttgatgacttgcatggactgttaaggtttctcaaagcaagtcctttcaat
gtacctaggtggtggatggaagtaataagagatccatatgagaagagagacgctggagcc
atggaatttacacacaattttttcaaacaaattatgtggcgctcatcaaaagtacaagtt
gcggatgaattgcaacttccacctcaagaggaatgcctctcttggctcatcttttcacca
attgaagagcatttctaccaacggcagcatgaaacttgtctgagttgtgctcgtgaagtt
attgaaagtttcaaagataatattcccaaaagaggtgtcccaggttgcgaatggtcaccc
tatgacttcattttctcctgcatttcttctttttcattttgttgtcaccctcaagttgga
agttcaggacttcggtctttgcaacagtcgcccatgactatggaggaaatactaatggtt
cttgtaaataagacgaaggttgagggtgaggaagctctcaggaggttagttgttgctttg
aatgggcttgcagcaatagctatgattgagaagaacttctctcaagctgcagcattgtac
aaggaagcactgcatatcaccaaggagcactctgaagattttcggctggatcctttgttg
aatattcacattcttcataaccttgcggagatacttccgttggttacagactctccagaa
caacctcccctggcaatgcaacaatattttggatgctctgaaatggagatagaaaatgac
aaaaaattatatcgtaatgctgtaaagaggcaaaaaattggtgagaaaggaaattctagt
tttgctgttggtgcagggaatctacctggtcatacatgcaacgattttgagaatgcctta
aaagatgagagaaaatgtgattatgagcaagaatctttgagaatagcatgtgagcaattg
aaaaataagtacttatctgcttttagttcgaagctttgtgctgctcagcaagatttcaaa
aaatcatttgtgcaggtttctagtgcatttagcgacagagacaaacaacctacagtctgg
tggttggaagcacttcatcatgctgaacagaatagggacttctcaaatgagttgatcaga
aagattgaagagtctgtctcaggaactctaaagacatcctcttcaagaatcgcatcccgc
ttccgaaccgttagtggtctaaaatatcatctccaaactggtctggatctgttggaaggc
tctaggaaaactttacttgatcgacttctagaaattgatcagacaatggaggaaccaaaa
gtggaagatattgaacgtgtgagacattgtcgaaattgccagggaattgatgatggttcc
acatgtcttcattgtgaagtggacgagttatttcaagattatgaggcaagattgttccgt
cttaccaaatcacatggagagatggttatatctgctgaagatgcagtggatatgcagaaa
aagaactccgctcttaaccgtttcttttggcatttatcagaaccaagtaaagtttcaact
tcatccagtgttggtaataaagaattaaagaagagaggtgttggtgaaaaagtagtggtt
tcaaaatccccctcagaattagaggttgttcttggagttataaaaagctgctgcaagtct
catttggggagggaaggcatgttggcagcctccaagcagctacaaactctggaggggatg
cggaaagagtatagccatgcaaggtcattggcaactgtgcaagctcaattcctacttgct
catgatgaaattaagatggcaaccaccaggttgcacctaagggaaaatgagaacgataaa
tctattgatgctatcagtccagatgaattagactcagctaatgcacaaaattctggtgag
aagttcacgtctttggccttgttagcaagtatacaagggaaacttcgttacttgaagggt
ttggttcaatccaagcagaaggatgcggtcaaaacttcaagtgattctttattaaatcaa
gaaatagctacaatttcaacttcagtggaacagaaaagtgaatacctatctaaagctgag
gaagcatgtccaatttgtcatgaaaacctcagcaagcaaaagatggttttccaatgtggg
catgttatctgctgtaaatgtctatttgccatgactgagcagagattaatttgtgatact
cagcacaagtggcttatgtgcccggtatgtcgacagcatacagatgtaagaaatatcgcc
tatgccgatgacagacaaaatagaccatgtaattctgatttgctgcacaaagttcaaggc
tatgagatgtctgaatcatctctgactgttcaaggctcatatggaacaaaaattgaagct
gttaccaggagaatcctgtggatcaaatctactgatccaaatgccaaagtacttgttttc
tcaagttggaacgatgttcttgatgtattagaacatgctttcactgccaatgatattacc
tatgtccgaatgaaaggaggcaggaaatctcaagttgctatcagcaaatttagaggtcag
caaagcaatgtaacagaatgtcacaaaagaaaagtccagcaggaaaaagcaaagtctttc
caagttttattgcttttaatccaacatggagcaaatggcctcaatctgttagaagcacag
cacgttatccttgtagagccactactgaatccagcagctgaagcgcaagctgtgagccgg
gtacaccgtattgggcaagagcataagacgctggttcatcgatttatagttaaaaacact
gttgaagagagcatctataaactgaacagaagcaggaacacaagttctttcattagcgga
aacaccaagaatcaagatgaaccccttttgacgcttaaagaagtcgagtctttatttgca
gtggtaggaaatgatgaaaaggcaagtgagaacctaagggatttaccgccttcggtggcg
gctgccagagcagccgagaggagactgagagagagcaatgcaagataa
DBGET
integrated database retrieval system
