Carica papaya (papaya): 110819891
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Entry
110819891 CDS
T05151
Name
(RefSeq) putative E3 ubiquitin-protein ligase LIN-1 isoform X1
Organism
cpap
Carica papaya (papaya)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Vac14_Fab1_bd
DUF5074
WDR54
Motif
Other DBs
NCBI-GeneID:
110819891
NCBI-ProteinID:
XP_021904910
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MASMSPFPALASFHDHEKPDLNSIQELVISVNKYIVELLANTEIWNSLRIRCTSRLHIEK
QEFFEFSEHSVISNLYWGIDSIENAIRAKFSEERTCRLQNSERMLQVPALLDEHGVTAGI
PNHYLVASSYFYLSMVRKLQGDQWQAALHFVQAFLVSPRFVQTEIALELCQSLFPSCSTS
ETHSKETGRRSESVLSKDFNDSNCEAARQIARRYKYYLTYYQVMSYGETTQQFNGSEDVP
LFDIKSQNYGDGTSSAAESSKLDEHATKSQTYCTKKAMQFEKVHPVDFQENKTDRVTEVP
KTNGKIPEIQDYSQHLNQIPKLKLRKAKLNTNLTIRCLQDILGEYQSDSPTSVDSHYNDS
GEDDFMENMDAVKSSGRAASTNAGDLQPGICHQKLAAPCSTSGREGTGKNLLQAPEHLMH
KEDELYTKKSFSGISLNSISDLNLSIMELQGKDSNSFPDAYEEDAANQMILEMHKVQGLE
HITSTSLKSCRFTQRDNRMSATRKMWNSHSQKRSNDVCIWSAKDPKSELLAKLEDAISKL
CFSKILHKHDEDYAVEATTICEMLNSKTGLKYTMLKDVILDQLLAAITTSKEETAIRASV
SILTTIISANKSVIEDIKKKGLQLSDLASALKQNVHEAATLIYLIKPSPTEIKSLELLPA
LVEVVCTSKTYKCRPTSLLLTPPGASLMIIEVLITAFDYDTNKTHLAAINSPRVLNGLLE
VAKDRNLKEFISLATVLIKCMQFDGQSRKYISQITPVAPFISLLQSNEKRANFVALEFFH
EILRMPRSSAISLLQQIWKEGSIHLMQTLILCVQQLQSDYQLFAANLLLQLDALDNSSGK
SMFKEEAMKAILKSMAEEGSSNQLLALFILSNIGGTYTWTGEPYTVAWLVKKAGLTSLHH
RNMIRDFDWLDQSLQDAGLDAWCSKISRSIIDMGKSVFDALEKGIKSKIKRVSRESLTTI
AWLGFEITKCSNAVKNLACEILLGGTEQYLHPGFELEERFLACLCIYNYASGKGMKKLIH
FSEGVRESLRRFSNVTWMAEELHQVADYYLPNKSRISCVHTQTAEMRQSSSGAVSALIYY
KGLLYSGYSDGSIKVWNIQMQSATLVWETNEHKKAVTCFSLFEPGERLLSGSADKTIRVW
QMIKGKLECIEVIAMKEPIRKLDTYGKIIFAITQGHKMKLIDSSRMVKSICKGKSVSCMT
VVQGKIYMGCTDSSIKELNITNNREREIKGPASIWRIQNKPISTILMYRDWLYNSSSAVE
VSNIKEWRKHCEPQMSIAAEKGAKILAMAVVEDFIYLNRSSSTSTLQIWLRKTHQKVGRI
SAGSKITSILTGNDVVLCGTETGIIKGWIPL
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatgtctcctttccctgcattagcttcatttcatgatcacgaaaaaccagac
ctcaattccatacaggaacttgtcatttctgtcaacaagtacattgttgagctcttagca
aacaccgagatctggaattcactgagaattagatgcacctccaggttacatattgaaaag
caggagttcttcgaattttcagagcattctgtcatttcaaatttgtactgggggatcgac
agcattgaaaatgcaattcgagcaaaattttcagaagaaagaacttgtcgactgcagaat
tctgagagaatgcttcaggtcccagcgttactagacgagcatggagttacagctggaatt
ccaaaccactatttggttgcctcttcctacttttatctctcaatggtgagaaaactccaa
ggtgatcaatggcaggctgcactgcattttgtccaagcattcttggtctctccaagattt
gtccaaactgaaattgctctagaactttgccagagtcttttcccctcctgctcgacatct
gaaacgcattcaaaggagacaggaagaaggtcagaatctgttcttagcaaggattttaat
gacagtaactgtgaagctgcaaggcagattgccagaagatataaatattacctaacttac
tatcaagtcatgtcatatggagagaccactcaacagtttaatggcagtgaagatgtgcct
ctctttgatatcaaatcacagaattatggggatgggacatccagtgctgcagaatcttca
aagttagatgagcatgcaaccaaatcacaaacatattgtacgaaaaaagcaatgcagttt
gagaaagtccacccagttgattttcaagaaaataaaactgatcgcgtcacagaagtacct
aagacaaatgggaagataccagaaattcaagattatagtcaacatttgaaccaaattcca
aagttaaaacttcgcaaggcaaagttgaacacaaatctaaccatcagatgcctccaggat
atcctgggagaatatcagtcagattcaccaacctcagtagattcacattacaatgattct
ggagaagatgattttatggaaaatatggatgctgttaaaagctcaggaagagccgcaagc
acaaatgcaggagatctgcaaccaggaatttgtcatcagaagcttgctgctccttgctct
acatcaggccgagagggcacaggaaaaaatctgctacaagctcctgagcatctaatgcac
aaagaagatgaactctataccaaaaagtctttttctggcatatctctcaattctatcagt
gatttaaatttatccatcatggagctccaaggtaaggactcaaacagctttcctgatgcc
tatgaggaagatgctgcaaatcagatgatattagagatgcataaagtccagggccttgaa
cacataacatctactagtctgaagagctgtaggttcacccagagggacaatcgaatgtct
gctacaaggaaaatgtggaattcccatagccaaaaaagatcaaatgatgtttgcatatgg
tcggcaaaagatcccaagagtgaattactggctaaacttgaggatgcgatttcaaaacta
tgtttttcgaaaatactacacaaacatgatgaagattatgctgtagaagctacaaccatt
tgtgaaatgttgaacagcaaaacagggctaaaatatactatgctaaaagatgtgattctt
gatcaactactagcagctattacgacttccaaggaggaaacagcaataagggcatcggtc
tctatactaacaacaatcatttcagcaaacaaatcagtcatagaggatataaagaagaaa
ggtttgcagttaagtgatttggcaagtgctctaaaacaaaatgtacacgaggcagctacc
ttaatctatttgataaagccatctcctacagaaataaagagtctagaacttttacctgca
ctggtggaggttgtgtgcacttcaaaaacttacaagtgcaggccaacatcacttctattg
acaccccctggggcatcattaatgattattgaagtgctaataactgcatttgactacgat
acgaacaaaacgcacttggccgcaatcaattctccccgtgtcctcaatggacttctggaa
gttgcaaaagatagaaatctgaaagaattcatatctttggccactgttctaataaaatgc
atgcagtttgatggccagtcaaggaaatatatatctcagattactcctgttgctccattt
atcagtctcctacaaagcaatgagaagcgtgcaaacttcgtagcacttgaatttttccat
gagatacttcgcatgccacggtcatcagccattagcctattgcagcagatatggaaagaa
ggaagcatacaccttatgcagacactaattctttgtgtccaacaattgcagtcagattac
caactttttgcagcaaatttattactgcaattggatgcactggataattcatccggtaaa
agtatgttcaaagaagaggctatgaaggccatcctaaagtcaatggctgaagaaggttct
tcaaaccagctattagccttattcattttatcaaatattggtggaacttatacatggact
ggggaaccgtatacagtagcatggttggtcaaaaaggcaggtttaacttccttgcaccac
cggaatatgataagagattttgattggttggaccaaagcttacaggatgcaggtctagat
gcatggtgtagtaagatctcaaggagtatcatcgacatgggaaaatctgtttttgatgct
ttagagaagggaataaagagtaagataaagagggtttcaagagaatctctcacaactatt
gcatggcttggtttcgaaataacaaaatgctcaaatgcggtaaaaaatttggcatgtgag
atcctccttggagggactgagcaatatttgcaccctggttttgagcttgaggaaaggttt
ctggcatgtttgtgcatctacaactatgcctctggtaaagggatgaagaagctaatccat
ttctcggaaggagtcagagaatctctgagacgtttttcaaatgtcacgtggatggcagag
gaattgcatcaagtagcagattactatctgccaaataaatcacgtatttcttgtgttcac
acacaaactgcggagatgcgtcagagcagcagtggtgcagtgagtgccctcatctactac
aaaggcctgctttacagtggttactcagatggctcaattaaggtgtggaacatccaaatg
cagtcagctacacttgtatgggaaactaatgaacacaagaaggcagtgacatgcttttca
ctctttgaaccaggggaacgtcttttaagtggatccgcagacaaaaccatcagggtctgg
cagatgatcaaagggaaactggaatgcattgaagtcatagcaatgaaagaaccaattcga
aagttggatacatatggaaaaattatttttgcaattacccaaggccacaagatgaagctg
atagattcatcgagaatggtgaaaagtatctgcaagggtaaaagtgtgagctgcatgact
gtagttcaggggaagatttacatgggctgcacggattcaagcataaaggagttaaacata
acaaacaatcgggagagagaaatcaaaggaccagcatcaatttggaggattcaaaacaaa
ccaatcagtacaatcctaatgtacagagactggctctacaactcaagttcggccgttgag
gtttcaaatatcaaggaatggagaaagcactgtgagcctcaaatgtcaatagctgcagag
aaaggagcaaaaatactagcaatggcagttgttgaagacttcatttacctaaaccgcagc
tcatcgacaagcacccttcagatatggctgagaaaaacacaccagaaagtgggaagaata
tcagcagggagtaagataacaagcatcctcactggcaatgacgttgttctatgcggtaca
gaaacagggataatcaagggctggatccccctatag
DBGET
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