Carica papaya (papaya): 110821056
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Entry
110821056 CDS
T05151
Name
(RefSeq) periodic tryptophan protein 2
KO
K14558
periodic tryptophan protein 2
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110821056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpap03009
]
110821056
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110821056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Utp12
NBCH_WD40
RMC1_N
WD40_like
WDR54
Utp21
Nup160
Motif
Other DBs
NCBI-GeneID:
110821056
NCBI-ProteinID:
XP_021906445
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MNYRFHNLLGAPYRGGNTLITKNTQLISPVGNRVSITDLIKSETITLPVQSSSNICRLAA
SPDGTFLLTVDENNRCLFINVPRRVVLHRITFKNQVHALKFSPDGKFIAVGTGKLLQIWR
SPAFRREVFAFELVRTFAEFDDKVVAIDWSLDSEYLLVGSKDLTARLFYVKKLKGALNKP
FLFLGHRDTVVGCFFGVDKQSNRVNNVYTVARDCYIFSWGYSGSDPKLDELRAEDSEPPS
PGTPERDMEENIESSGDGNVRKRKNFDGILEKKEYLHRGKWERLRKDGFMQGSAKVTSCD
YHRGLDLLVVGFSNGVFGLYQMPDFVCLHLLSMSREKITTAVFNELGNWLTFGCAKLGQL
LVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFSEHT
NAVTALHFMANNQCLLSASLDGTVRAWDLLRYRNFRTFTTPSSRQFVSLAADQSGEVICA
GTLDSFEVFVWSMKTGRLLDILSGHEGPVHGLMFSPTNSVLASSSWDKTVRLWDVFEGKG
AVETFSHTHDVLTLTYRPDGKQLACSTLDGQIHFWDPINGLLMYTIEGRRDIAGGRLMTD
RRSAANSTSGKCFTTLCYSADGSYILAGGSSRYICMYDVADQVLLRRFQITHNLSLDGVL
DFLNSKKMTDAGPLDLIDDDNSDTEEGVEKQTRGDLGYDLPGSMPNRGRPIIRTKCLRIA
PTGRSFAAATTEGVLVYSIDESFIFDPTDLDMDVTPEAIDAALNEDQPNRALILSLRLNE
DALIKKCIFAVAPVDIPAVVSSIPLKYLQRLVEALADLLESCPHLEFILCWCQELCKAHG
SSIQQNSRNLLPSLKSLQKAITRIHQDLAAMCSSNEYMLRYLCSMNIKN
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaactatcgtttccataacctcctgggtgccccctatcgaggaggcaacacacttatc
acgaaaaatactcagttgatttctccagtcggtaaccgggtatccatcactgacctaata
aaatccgaaaccataaccctccctgtccaatcttcatccaacatttgtcgcttggcagct
tctcctgatggcaccttcctcctcacagtcgacgagaacaaccgctgtctcttcatcaat
gtccctcgccgagtcgtccttcacagaatcacgttcaagaatcaggtgcatgctttgaaa
tttagccctgacggcaagtttattgcagtgggtactggtaagttgcttcaaatatggcgg
tctccggctttcaggagagaggttttcgcttttgagttagtaagaacatttgcagagttt
gatgataaggttgttgctatagattggagcttagattccgagtatttgcttgtcgggtca
aaagacctgactgcgaggttgttttacgttaagaaactaaagggtgccttgaataagcca
tttttgtttctgggtcatagagatactgttgtgggttgcttttttggtgttgataagcag
agtaatagggtaaataatgtatacaccgttgcacgcgattgttatatttttagctggggt
tatagtggaagtgatcctaaattagatgaattacgagcggaggactctgaaccaccctca
ccaggtacgccagagagggatatggaggagaatatagagagtagtggagatgggaatgtg
aggaaaaggaagaattttgatggtattttggagaaaaaagagtatttgcatagagggaag
tgggaaaggttgaggaaagacgggtttatgcagggatcagcgaaggtgacttcatgtgat
tatcataggggccttgaccttttggtggtggggttctcaaatggtgtttttgggctttac
caaatgcccgattttgtttgtctccatttgctttcaatgtcaagagaaaaaattacaaca
gcagtgttcaatgagcttgggaattggttgacatttggttgtgcaaagttggggcagttg
ttagtttgggagtggcgatctgaaagctatatattgaagcagcagggacattattttgat
gttaattgccttgcttattcaccggattcacagcttttggctactggtgctgatgataat
aaagtcaaggtttggacagtttcttctggcttttgctttgtcacgttttcagaacacact
aatgctgtcactgctctccattttatggcaaacaaccaatgtcttttaagtgcttctctg
gatggaactgttcgtgcatgggatttgttacgttatcggaattttaggacatttactacc
ccttcttctagacagtttgtttctttagcagcagatcaaagtggtgaagttatttgcgct
ggaactcttgattcctttgaggtttttgtttggtcaatgaagactggccgtttgttggat
attctcagtggtcatgaaggtcctgttcatggattaatgttttctcctacgaattcggtc
ttggcttcatcttcatgggataaaactgttcggctgtgggatgtctttgaagggaaaggt
gctgttgaaactttttctcacactcatgatgttcttacactaacttatcgcccagatgga
aagcaattggcttgcagcacactagatggacagattcatttctgggatccaattaatgga
ttattgatgtacacaattgagggccgtagggatattgctggaggacgacttatgaccgat
cgcagatcagcagctaactccacttctgggaagtgcttcacaactttatgttattctgct
gacggcagttacatattagctggtggaagtagcagatacatctgtatgtatgacgtagct
gatcaggttcttctacgtagatttcagataactcacaatctctcactagatggagttcta
gacttcttaaactcaaagaagatgacggatgctggcccactggacttgattgatgatgat
aacagtgatacggaagaaggtgttgagaaacaaacccgaggagacttaggttatgattta
ccaggatccatgcccaatcgtgggaggcctattattagaacaaaatgccttagaattgca
ccaactggaaggagctttgcagcagcaacaacagagggagttctagtttattcaattgat
gaatcttttatcttcgatcccactgatcttgacatggatgttacacctgaggccattgat
gcagcactaaatgaagatcaaccaaatagggctttgattcttagcctgcgtttaaatgaa
gatgctcttataaaaaaatgcatttttgctgttgctccggttgatattccagcagttgtc
tcatcaattcctttaaagtatttgcaaaggctggtggaagccttagctgatctcctagaa
agctgcccacatttggagttcatcctttgttggtgtcaggaactatgcaaagctcatggt
agctccattcagcagaattccagaaatcttcttccttctttgaaatccttgcagaaggca
attactagaatccatcaggacttggcagctatgtgttcttccaatgaatatatgcttcga
tatttatgctccatgaacataaaaaactaa
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