Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c02020
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Entry
CLPA_c02020 CDS
T03753
Symbol
lagD
Name
(GenBank) lactococcin-G-processing and transport ATP-binding protein LagD
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat02010
ABC transporters
cpat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLPA_c02020 (lagD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLPA_c02020 (lagD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpat01002
]
CLPA_c02020 (lagD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpat02000
]
CLPA_c02020 (lagD)
Peptidases and inhibitors [BR:
cpat01002
]
Cysteine peptidases
Family C39
CLPA_c02020 (lagD)
Transporters [BR:
cpat02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CLPA_c02020 (lagD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
AAA_22
nSTAND3
ABC_ATPase
SMC_N
AAA_24
DEAD
6PF2K
AAA_18
AAA_29
AAA_13
AAA
AAA_5
TsaE
Roc
Peptidase_C39_2
DUF3335
Motif
Other DBs
NCBI-ProteinID:
AJA50290
UniProt:
A0A0H3J0U9
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All DBs
Position
211604..213634
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AA seq
676 aa
AA seq
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MKNLFKKYICIKQHDAKDCGCACLATIFKQYGLKISISKIRETAGTDRQGTSAYGIIKAA
EKIGFTAKGVKVNKSEDIFSEFPIPAIAHVIIDKKFPHYVVIHRIHKKEIVVADPEKGIV
KYKPEDFFKIWTGILILMTPTVEFKKGNEDKGVFKRFFGLLKPQKGLLTNIFFASLVLTT
LGILASFYFQSLMDTIIPQNLSKTLIEISIGVICLNVFKVLLDAFRTQLLIYLGQNINIP
LMIGYYNHVVNLPMNFFGTREVGEIISRFNDASKIRDAISGATLTIMIDTLMVIFGGAIL
YTENHLLFGITIVPVILYLIIVWVFNSSIERVNKKTMEDNASLTSYLVESLNGIETVKAF
NGERKVNFEMEKRFIKLIKSVFNNGFISNIQGSVKTAVQTIFGTIILWIGAYEVLRGNMT
IGQLLTFNALLAYFLDPIQRIINLQPTVQTAIVAADRLGEILDLELEKSENEDKKIFPST
LKGEIELKNVDFRYGTRQLVLKDINISIAPGEKIALVGESGSGKTTISKLLMNFYQCENG
EVLINGYNIKDINIEALRDKIAYISQNVFFFSGTIKENLSFGAEGTTFEEMIEACKKSQI
NDYINSLPTRYNTLLEENASNLSGGQKQRLAIARAILKKPEILIMDEATSNLDSITEKAI
ENTINEFSKDITSLLS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacctatttaaaaaatatatttgcattaaacagcatgacgcaaaagattgtggc
tgcgcttgcttagctacaatttttaaacaatatggtttaaaaatatcaatatctaaaata
agagaaactgcgggaacagataggcagggaaccagtgcttatgggattattaaagcagca
gaaaaaattggatttactgctaaaggagttaaggtaaataagtcagaggatatatttagt
gaatttccaatccctgctattgctcatgtcattatagataaaaaatttcctcactatgta
gtaatacatagaatacataaaaaagaaattgttgtagcagatcctgaaaagggtattgtt
aaatataaaccagaagatttctttaaaatttggacaggaatattgatattaatgacaccc
actgttgaatttaagaaaggtaatgaagataagggagtatttaaaagattttttggattg
ttaaaaccacaaaaaggattgcttacaaatatattttttgcttccttggtacttactacc
cttggtatattagcttctttttattttcaatcgctcatggataccataataccacaaaat
ttatctaaaacattaatagaaatttctataggtgttatttgtctaaatgtattcaaagta
ctattggatgcttttagaactcagcttctcatatatttagggcagaatataaatatacca
ttaatgattggatattataatcatgtagtaaatcttcctatgaacttttttggtacaaga
gaagtaggagaaattatctcaagatttaatgatgcttcaaagataagagatgctatttca
ggggcaactcttactattatgatagatacgttaatggttatctttggtggagctatactt
tatactgaaaatcatttactgtttgggatcacaatagttcctgtaattttatatttaatt
atagtctgggtttttaatagttctattgaaagagttaataaaaaaacaatggaagacaat
gcaagtcttacatcttatctagtggaatccctaaatggtatagagacagttaaagctttt
aatggtgaaagaaaagttaactttgaaatggaaaagagatttataaagctaataaaaagt
gtatttaataatggatttataagtaatattcaaggctctgtaaaaacagcagtacaaact
atttttggtacgataattctttggataggagcttatgaagtgttaagaggaaatatgact
ataggtcagcttttgacttttaatgcactgcttgcatattttttagatcctattcagcgt
attataaatcttcagccaactgttcaaaccgccatagttgctgcagacagattaggtgaa
atattggatttagagcttgaaaaaagtgaaaatgaggataaaaaaatatttccttcaact
ttaaagggagagattgaattaaaaaatgtagattttagatatggtacaaggcaattggtg
ctaaaagatataaatataagtatagcacctggtgagaaaatagcactagtaggagaaagt
ggttctggtaaaactactatttcaaaactgcttatgaatttttatcaatgtgaaaatgga
gaagttttaatcaatggctataatattaaagatattaatattgaagccttaagggataag
atagcttacatatcacaaaatgtatttttctttagcggtactataaaggaaaacttgagt
tttggagctgagggaactacttttgaagagatgatagaggcatgtaaaaagtcacaaata
aatgactatattaattcactgcctacaagatataatactttgttggaggaaaatgcatct
aacctttcaggcggtcaaaagcaaagactcgccatagcaagagcaatactcaaaaagcca
gaaatacttataatggatgaggccacaagtaatttggattctataacagaaaaagctatt
gaaaacacaataaatgaattcagtaaggatatcacttcactactatcataa
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