Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c22620
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Entry
CLPA_c22620 CDS
T03753
Symbol
rumA1
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpat03009
]
CLPA_c22620 (rumA1)
Enzymes [BR:
cpat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CLPA_c22620 (rumA1)
Ribosome biogenesis [BR:
cpat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLPA_c22620 (rumA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Cons_hypoth95
Methyltransf_25
Met_10
Methyltransf_15
PrmA
Methyltransf_32
N6_N4_Mtase
PCMT
Methyltransf_4
Methyltransf_11
Methyltrans_SAM
FtsJ
Methyltransf_12
UPF0020
SAM_MT
DOT1
Ubie_methyltran
TRM
Motif
Other DBs
NCBI-ProteinID:
AJA52320
UniProt:
A0A0H3J595
LinkDB
All DBs
Position
complement(2425820..2427184)
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AA seq
454 aa
AA seq
DB search
MRRHKEYEFEVVDIEFPGMGIAYSEDRKIYIKGAVPGQKILGNVKKLKKEYGEAKLIKSL
NSIEGEVTPKCPHFGVCGGCTHQFIDYEEQIRLKEIQLLKLFKEADIEGFEYEGIEKSPK
EFEYRNKMEFSFGDVEKGGELTLGMHIRNKAFGIVNVHECTLVSKDFRVILDTVVNYFRD
KNTTYYRIMKREGYLRNLVIRETEHTGEILVNLVTTSQDEFNIEEFTKLLLDLDLEDKIV
GILHTTNDSFSDVVAADRIDILYGRDYIVEKVLGLKFKISPLSFFQTNTLGAEKLYSIVM
DFIGEAASKLIFDLYCGTGTIGQIAAAKNAKKVIGIELIEEAVKAANENAKLNDLDNCNF
IAGDVAKVIQDLQDKPDVIILDPPRPGVHPKALDYVIKFDAKEIVYVSCNPKTLMVDLRK
LIDRGYKVERVKGMDMFPMTGHLECVVRLERKHM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgagaagacacaaggaatatgaatttgaagtagtagatatagaattcccaggtatgggt
attgcctatagtgaagatagaaaaatatacataaaaggcgcagttccaggacaaaaaata
ctgggaaatgtaaaaaaacttaagaaagaatatggtgaggcaaagcttataaaatctctt
aacagtatagaaggagaagttactccaaagtgtcctcactttggagtctgtggaggttgt
actcatcaatttattgattatgaagagcaaattagattaaaagaaatacagctgttaaaa
ctctttaaagaggcagacatagaaggttttgaatatgaaggcatagaaaaaagccctaaa
gaatttgagtacagaaataaaatggagttcagctttggagatgtggaaaagggcggagag
cttactttaggtatgcatataagaaataaagcctttggaattgtaaatgtccatgaatgt
actcttgtttccaaagattttagagtgatcttagacacagttgtaaactactttagagat
aaaaatacaacttattatagaataatgaaaagagaaggatatcttagaaatctggtaatc
agagagacagaacatacaggagaaattctagttaatttagtaaccacttctcaagatgag
tttaatatagaagaatttactaaattattgctggatcttgatttagaagacaaaatagtc
ggaattcttcacactaccaatgattccttttcagatgtagtagcggcggatagaattgat
atactctatggaagagattatatagttgaaaaagtacttggacttaagtttaaaatatca
ccactgtctttttttcaaactaatactcttggagctgaaaaactctatagtatagttatg
gactttataggcgaagcagcttcaaaacttatctttgatttatactgtggtacaggtacc
attggtcaaattgcagcggctaaaaatgctaaaaaagtcataggtattgaacttatagaa
gaagcagtaaaagctgcgaacgaaaatgcaaagctgaatgatctggataactgcaatttc
atcgcaggagatgtagcaaaagtaattcaggatcttcaggataaaccagatgtaataatc
cttgatccaccaagaccgggagtgcatccaaaggcattggattatgtaataaaatttgat
gccaaggagatagtatatgtttcctgcaatcctaagactcttatggtagatcttaggaag
cttatagacagagggtataaggtggagagagtaaaagggatggatatgtttcctatgaca
gggcatttggaatgtgtggtgaggctagaaaggaaacacatgtag
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