KEGG   Chaetura pelagica (chimney swift): 104386111
Entry
104386111         CDS       T08631                                 
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104386111 (SMG7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpea03019]
    104386111 (SMG7)
Messenger RNA biogenesis [BR:cpea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     104386111 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104386111 (SMG7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2 TPR_17 TPR_7
Other DBs
NCBI-GeneID: 104386111
NCBI-ProteinID: XP_009992951
LinkDB
Position
Unknown
AA seq 1174 aa
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHG
HVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVF
QEAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFELQGFLALRPSFRNLDFSK
GHQAITGDKEGQQRRIREQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPS
EAKESLTLQETSIAEPLSTDGSPGLKSVLCSGRSLNSNCDTGEKPMVTFKENIKPRELNR
EQGRIYPPKDVGRERRDYIKGIVASKNDGKKDNNKRKTEIKKCSLDKMQEAGKQNVAVQV
KSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPAYVVPPPV
AFSMSTGYTFPGGVSVPGAFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQ
TPPPSQQPLSSLPAQATAQSTSQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQYPQ
TDSSKQLWSPPQVQGSLGKIMPVKQPYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFP
MEPYNQNPSEVKVPEYYWDPAYGMGDSRVMAQQSSVDRRGKRQGVFRPEQDAVSRMTFED
PKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELM
SQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVSPSVAHQETSLYSLFEGTP
WSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDSRDRRVADR
WKTDKPAMGGFGLDYLPATSSSSESSWHQSSTPSGTWAAQGPPSMEDSSAVLMESLKSIW
SSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgacagattcgaagctgggtccagcagaagtctggacatccagacaggctctccaggac
ttatatcagaaaatgctagtgactgatttggaatatgctttagataaaaaagtggagcaa
gatctttggaatcatgcctttaaaaatcagatcacgacgctacagggtcaggcgaaaaac
agagcaaatccgaatcggagtgaagttcaggccaacctttctctgttcttagaggcagct
agtggcttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgcca
tgtcgtgtaaagtcttcccaactgggaatcattagcaataaacagacgcacaccagcgcc
attgtgaagccgcagtccagctcctgctcttacatctgccagcactgccttgtccacctt
ggagatattgctcgctataggaatcagaccagccaggcagagtcttactacagacatgca
gctcagcttgtcccttctaatggtcagccttataatcagttggctattctagcttcctcc
aaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcct
ttcccagctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgat
gaggtgaagactcgatggagcgtgtctgacttcatcaaggcatttattaaattccatggc
catgtgtacctgagtaagagcctggagaagctgagccctcttcgagaaaagctggaagag
cagttcaagaggttgttattccaaaaggccttcaattctcagcagttagtacatataact
gtcatcaatctctttcaactacatcacctacgagacttcagcaacgaaacggagcagcac
agctacagccaggatgagcagctctgctggacacagctactggctctcttcatgtccttt
cttggagttctgtgcaagtgtcctttacaaaatgactaccaggaggactctggggctgca
tatcctcttccagctgtgaaggtttcaatggactggctgaaacttaggcccagtgttttc
caggaggcggtggttgatgagagacggtacatatggccctggctgatttctcttctaaac
agcttccagcctcatgaagaagatctatccagtaataatgcaaccccccttccagaagaa
tttgagttgcaaggattcttggctctgaggccctcattcaggaacttggatttttccaaa
ggccaccaggcgattacaggagacaaggaggggcagcagcgtcggatacgggaacaacgt
ctgatcttcacaggcaaatggattgctgataaccagccaaggttgattcagtgtgaaaat
gaggtaggaaagctgttgtttctgacggaaatcccggagttgttgctggaggaccctagt
gaagccaaagagagtctcaccttgcaagaaacatctattgcagaacctctatctactgat
gggagccctggactcaaatcagttctgtgctctggcagaagcctcaacagcaactgtgac
acgggagaaaaaccaatggtcactttcaaagagaacatcaagccacgggaattgaacaga
gagcaagggcgaatctatccccctaaagatgtaggcagggaaagaagggactatatcaaa
ggaatagtagccagtaagaatgatgggaagaaggataacaataaaagaaagactgagatc
aagaaatgcagcttggacaagatgcaggaagcaggaaagcagaacgtggcagttcaggtg
aaatcccagacggagatgaggaagactccggtgtctgaagccaggaaaacacctgtaact
cagactcccagtcaggccagcagttctcagttcatccccattcatcacccaggagccttc
cctccccttcctagccggccagggtttccacctccagcctacgttgtcccccctcctgtg
gctttctccatgagcacggggtacaccttcccaggtggtgtttctgtcccaggagccttc
ctccagcccacagctcactcgcccgcaggaaaccaggtgcaaggtgggaaacaatcccac
attccttacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaa
acaccacctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtcc
acaagccagttacaggtccaagctctggcccagcaacagcagcaacagtccccgacgaaa
gccgtgcagggcctggggaagagcccaccacaccactccggattccagcagtatccccag
acagactcatcaaagcagctctggagcccacctcaagtccaaggctcgctggggaagatc
atgcctgtcaagcagccctattacctgcaggcccaggaccctctaaaattatttgaacag
tcattacagccccccgtgatgcaacagcaacctctggagaaaaaaatgaagcctttccca
atggagccatataaccagaacccctcagaagtcaaggtgccagaatattactgggaccct
gcctatggcatgggtgacagtagggtgatggcacagcagtccagcgtggaccgcagggga
aagcgccaaggagtcttccgcccagagcaggatgctgtctccaggatgacctttgaggac
cccaagagctcccctctgcttcctccggacctgttaaagagtctggctgccttggaggag
gaggaagagctgattttctctaatcctcctgatctttacccagctctgctggggcctctc
gcctctcttcctggacgaagcctctttaagtctctgctggaaaaaccatcagaattgatg
tctcagtcatcatctttcctctccctcagtggcttttctcttaatcaggaaagatatcca
aataacagcatgttcaatgaggtttatgggaaaaacatgaataccagcacaaaaacagaa
gtcagcccttcagttgcccatcaggagacttcactatattctctgtttgaagggactccg
tggtctccatcccttccagccagctcagatcactcaacaccagccagccagtctcctcac
tcctccaaccccagcagcttgccgagctcccctccaacccataaccacaactctgttccc
ttctccaactttggacctattgggaccccggacagcagagacaggagagtcgcagaccgc
tggaaaacggataagccagcaatgggagggtttggtctggactatctcccagcaacgtcg
tcgtcttcggagagcagctggcaccagtccagcactcccagtggcacctgggcagcccaa
ggtccccccagtatggaggactcctctgctgtgcttatggagagcctgaagtccatctgg
tccagttccatgatgcaccctggaccctcagccctggagcagctgttaatgcagcagaag
cagaagcagcaacgtggacaaggcaccatgaacccgccgcattga

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