Chaetura pelagica (chimney swift): 104386111
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Entry
104386111 CDS
T08631
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104386111 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104386111 (SMG7)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104386111 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
104386111 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
TPR_17
TPR_7
Motif
Other DBs
NCBI-GeneID:
104386111
NCBI-ProteinID:
XP_009992951
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHG
HVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVF
QEAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFELQGFLALRPSFRNLDFSK
GHQAITGDKEGQQRRIREQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPS
EAKESLTLQETSIAEPLSTDGSPGLKSVLCSGRSLNSNCDTGEKPMVTFKENIKPRELNR
EQGRIYPPKDVGRERRDYIKGIVASKNDGKKDNNKRKTEIKKCSLDKMQEAGKQNVAVQV
KSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPAYVVPPPV
AFSMSTGYTFPGGVSVPGAFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQ
TPPPSQQPLSSLPAQATAQSTSQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQYPQ
TDSSKQLWSPPQVQGSLGKIMPVKQPYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFP
MEPYNQNPSEVKVPEYYWDPAYGMGDSRVMAQQSSVDRRGKRQGVFRPEQDAVSRMTFED
PKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELM
SQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVSPSVAHQETSLYSLFEGTP
WSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDSRDRRVADR
WKTDKPAMGGFGLDYLPATSSSSESSWHQSSTPSGTWAAQGPPSMEDSSAVLMESLKSIW
SSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaagctgggtccagcagaagtctggacatccagacaggctctccaggac
ttatatcagaaaatgctagtgactgatttggaatatgctttagataaaaaagtggagcaa
gatctttggaatcatgcctttaaaaatcagatcacgacgctacagggtcaggcgaaaaac
agagcaaatccgaatcggagtgaagttcaggccaacctttctctgttcttagaggcagct
agtggcttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgcca
tgtcgtgtaaagtcttcccaactgggaatcattagcaataaacagacgcacaccagcgcc
attgtgaagccgcagtccagctcctgctcttacatctgccagcactgccttgtccacctt
ggagatattgctcgctataggaatcagaccagccaggcagagtcttactacagacatgca
gctcagcttgtcccttctaatggtcagccttataatcagttggctattctagcttcctcc
aaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcct
ttcccagctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgat
gaggtgaagactcgatggagcgtgtctgacttcatcaaggcatttattaaattccatggc
catgtgtacctgagtaagagcctggagaagctgagccctcttcgagaaaagctggaagag
cagttcaagaggttgttattccaaaaggccttcaattctcagcagttagtacatataact
gtcatcaatctctttcaactacatcacctacgagacttcagcaacgaaacggagcagcac
agctacagccaggatgagcagctctgctggacacagctactggctctcttcatgtccttt
cttggagttctgtgcaagtgtcctttacaaaatgactaccaggaggactctggggctgca
tatcctcttccagctgtgaaggtttcaatggactggctgaaacttaggcccagtgttttc
caggaggcggtggttgatgagagacggtacatatggccctggctgatttctcttctaaac
agcttccagcctcatgaagaagatctatccagtaataatgcaaccccccttccagaagaa
tttgagttgcaaggattcttggctctgaggccctcattcaggaacttggatttttccaaa
ggccaccaggcgattacaggagacaaggaggggcagcagcgtcggatacgggaacaacgt
ctgatcttcacaggcaaatggattgctgataaccagccaaggttgattcagtgtgaaaat
gaggtaggaaagctgttgtttctgacggaaatcccggagttgttgctggaggaccctagt
gaagccaaagagagtctcaccttgcaagaaacatctattgcagaacctctatctactgat
gggagccctggactcaaatcagttctgtgctctggcagaagcctcaacagcaactgtgac
acgggagaaaaaccaatggtcactttcaaagagaacatcaagccacgggaattgaacaga
gagcaagggcgaatctatccccctaaagatgtaggcagggaaagaagggactatatcaaa
ggaatagtagccagtaagaatgatgggaagaaggataacaataaaagaaagactgagatc
aagaaatgcagcttggacaagatgcaggaagcaggaaagcagaacgtggcagttcaggtg
aaatcccagacggagatgaggaagactccggtgtctgaagccaggaaaacacctgtaact
cagactcccagtcaggccagcagttctcagttcatccccattcatcacccaggagccttc
cctccccttcctagccggccagggtttccacctccagcctacgttgtcccccctcctgtg
gctttctccatgagcacggggtacaccttcccaggtggtgtttctgtcccaggagccttc
ctccagcccacagctcactcgcccgcaggaaaccaggtgcaaggtgggaaacaatcccac
attccttacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaa
acaccacctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtcc
acaagccagttacaggtccaagctctggcccagcaacagcagcaacagtccccgacgaaa
gccgtgcagggcctggggaagagcccaccacaccactccggattccagcagtatccccag
acagactcatcaaagcagctctggagcccacctcaagtccaaggctcgctggggaagatc
atgcctgtcaagcagccctattacctgcaggcccaggaccctctaaaattatttgaacag
tcattacagccccccgtgatgcaacagcaacctctggagaaaaaaatgaagcctttccca
atggagccatataaccagaacccctcagaagtcaaggtgccagaatattactgggaccct
gcctatggcatgggtgacagtagggtgatggcacagcagtccagcgtggaccgcagggga
aagcgccaaggagtcttccgcccagagcaggatgctgtctccaggatgacctttgaggac
cccaagagctcccctctgcttcctccggacctgttaaagagtctggctgccttggaggag
gaggaagagctgattttctctaatcctcctgatctttacccagctctgctggggcctctc
gcctctcttcctggacgaagcctctttaagtctctgctggaaaaaccatcagaattgatg
tctcagtcatcatctttcctctccctcagtggcttttctcttaatcaggaaagatatcca
aataacagcatgttcaatgaggtttatgggaaaaacatgaataccagcacaaaaacagaa
gtcagcccttcagttgcccatcaggagacttcactatattctctgtttgaagggactccg
tggtctccatcccttccagccagctcagatcactcaacaccagccagccagtctcctcac
tcctccaaccccagcagcttgccgagctcccctccaacccataaccacaactctgttccc
ttctccaactttggacctattgggaccccggacagcagagacaggagagtcgcagaccgc
tggaaaacggataagccagcaatgggagggtttggtctggactatctcccagcaacgtcg
tcgtcttcggagagcagctggcaccagtccagcactcccagtggcacctgggcagcccaa
ggtccccccagtatggaggactcctctgctgtgcttatggagagcctgaagtccatctgg
tccagttccatgatgcaccctggaccctcagccctggagcagctgttaatgcagcagaag
cagaagcagcaacgtggacaaggcaccatgaacccgccgcattga
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integrated database retrieval system