Chaetura pelagica (chimney swift): 104388839
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Entry
104388839 CDS
T08631
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104388839 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104388839 (USP9X)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104388839 (USP9X)
Peptidases and inhibitors [BR:
cpea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104388839 (USP9X)
Ubiquitin system [BR:
cpea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104388839 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Vps23_core
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
104388839
NCBI-ProteinID:
XP_009996066
LinkDB
All DBs
Position
Unknown
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQAQGDAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHQYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTVSPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGKEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDNELIKYISELAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggagggaatgatagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttccaat
gagaactccccagctaccccacctgatgagcaggctcaaggagatgctccaccccagctt
gaagatgaagagcctgcgtttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggtcgttcctgtattgccgaaaggggagttagaagttcttctagaagct
gccatcgacctaagtaaaaaaggccttgatgttaaaagtgaagcatgccagcgatttttt
cgagatgggttaacaatatctttcacaaaaatccttacagatgaggcagtaagcggctgg
aagtttgagattcatagatgtattattaacaacactcatcgactagtggaactttgtgtg
gccaagctgtcccaagattggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatcagtacaatggtactcgtccctcagaaacagttcctgcaggagtt
cagctcgctgaagatgaactttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagaccttatcaacaagtttggcacattaaatggatttcagatcttgcatgatcgc
ttcatgagtgggtcagcattgaatgttcagataattgcagctctcattaagccatttgga
caatgctacgaatttctaacattacatacagtgaagaaatatttccttccaattatagaa
atggttccacaatttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctgtcaatgataatcaaatctttaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaacttagaaatatttaggttaaaaatgatactt
aggttgttacaaatttcttctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtgtcatattacactcatcggcatggtaatcctgaagaggaggagtgg
cttacagctgaaagaatggcagaatggatccagcagaataatattctatcaattgtattg
agagacagtcttcatcagcctcagtatgtagagaagttagaaaaaattcttcgttttgtc
atcaaagagaaagccctcactttgcaggaccttgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaaaaatgtacatgatctccttgcaaaattagcttgggatttc
tctcctgaacagcttgatcacctgtttgactgttttaaggcaagttggacaaatgcaagc
aagaaacagcgtgagaaactacttgagttaattcgtcgtcttgcagaggatgacaaggat
ggtgtgatggcacacaaagtgctgaaccttttgtggaatttggctcatagtgacgatgta
ccagtcgatatcatggaccaggcccttagtgcccatattaaaatcttagattacagctgt
tcacaggatcgagatacacaaaagatccagtggatagatcgttttatagaagagcttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattagagaaatttgcagtttgttt
ggtgaagcaccgcaaaacttaagtcaaactcagcggagcccccatgtgttttaccgacat
gacttaatcaatcaacttcagcacaatcatgccctagttacattggttgcagaaaatctc
tctgcctatatggaaagcatgaggcagtatgctaaagagcacggtgaatatgatcctcaa
actgtaagaccaggaagcagatacagtcatgtgcaggaagtacaggagcgacttaacttc
ttacgatttttgttgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagctgaaaatgcggtttatctttgtgatcgtgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagctagtagcaaagagacgagcc
tatatgatggatgatctggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacattgcaaacagagcaatagatcttctgaaagagatctatactaatctt
gggccacggttacaagttaatcaggtagtgattcatgaagatttcattcagtcctgtttt
gatcgactaaaagcttcctatgatactttatgtgtgttggatggagataaagacagtatc
aattgtgcaagacaagaagcaatacgaatggtgagagtgttgactgttttaagagagtat
ataaatgaatgtgacagtgattaccacgaagagaggactattctacctatgtcaagagct
ttccgtgggaaacatatcacactggtagttcgttttccaaaccaaggccgacaggtggaa
gatctggatatttggtctcacacaaatgacacaattggccaagtacggcgttgtattctc
aatcgtattaaagccaatagtgcacacacaaaagtagaactgttcattggtggtgagctg
gtggaccctgcagatgacagaaaattaattggacagttgaatctcaaagataaaacgcta
attacggctaagcttacacagataaattctaatatgccttcaagcccagatagttcctct
gactcttcaactggttctccgggcaaccatggcaatcactacagcgatggtccaaatcca
gaagttgaaagctgtttgcctggagtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagtagcagacttgggcagtagcctaaatatgccacctcttagggatggagca
cgtgttcttatgaagctcatgccaccggataacactacggttgagaaactgagagctatt
tgtttagatcatgcaaagcttggggaaagcagccttagcccatcccttgattctctgttc
tttggtccttctgcctcacaagtgctatacctaacagaggtagtttatgccttgttaatg
cctgccagtgcacctctgggagaagatgccagcgacttccaatacaacttcttaaaaagt
ggtggcttgcctcttgtgttgagcatgctgactagaaataacttcctgccaaatgcagat
atggaaactcgaaggggcgcctaccttaacgctctaaaaatagcaaaattattgctaaca
gcaattggatatggccacgttcgagctgtggcagaagcgtgtcaaccagttgtggaaggc
acaagtacagtttcaccgataaaccaggctacgcatgaccaggcagtagtactacaaaat
gccctacaaaacattcctaatccaacttcagaatgcatgctaagaaatgtagcaattcgt
cttgcacagcaaatttctgatgaggcttcaaaatacatccctgatatttgtgttattagg
gcagtacaaaaaattgtttgggcatcaggttgtggctcagttcagctggttttcagctca
aatgaggaaattagtaaaatctatgaaaagacaaatgcaggaaaagaaccagacatggag
gatgaacaagtttgctgtgaagcactggaggtgatgaccctgtgttttgctttgattcca
acggcgctggatgcactcagtaaagaaaaggcgtggcagacatttatcattgatttgcta
ttgcactgtcacagcaaaactgttcgtcaaatggcacaggagcaattctttttaatggct
acgaggtgttgcatgggacagagacctctccttttcttcattacactgctatttactgtt
ctagggagtactgcaagagagagagctaagcattctggagactacttcacactcttaaga
catcttcttaactatgcctacaacagtaatattaatgtacccaatgctgaagttcttctc
aataatgaaattgactggcttaagaggattagggatgaagtaaaaagaacaggggaaaca
ggtgtcgaagaaactatcttagagggtcaccttggagtaacaaaagagttgttagcattc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaaa
gagttgatagatgatttcatctttccggcatccaatgtttatctacaatacatgagaaat
ggagaattgcctgctgagcaggccatacctgtctgtagttcaccagctactattaatgct
gggtttgagctactagttgcactagctgttggatgtgttcgaaatctgaaacagatagta
gacaccttgactgaaatgtattacataggtacagcaatcactacctgtgaagctcttaca
gaatgggaatatctgccacctgttgggcctcgaccgccaaagggatttgtaggactaaaa
aatgctggtgccacttgttacatgaattctgtcattcagcagctgtacatgattccagcc
atcaggaatgggattcttgcaatcgaaggcacaggcagtgatgtggatgatgacatgtct
ggggatgaaaagcaggacaatgagagcaatgttgacccgcgagatgatgtgtttggttat
ccgcatcagtatgaagacaaaccagcactgagtaaaacagaagatagaaaagagtacaat
attggagttctgaggcatctccaagtgatttttggtcatttagcagcttccaggctgcag
tactatgtaccaagagggttttggaaacaatttagactttggggtgaacctgtgaatcta
cgtgaacaacatgatgctttagaattctttaattccttggtggacagtttagatgaagct
ttaaaagctttgggccatccagcaatgttaagtaaagttttaggagggtcctttgctgat
cagaagatttgtcaaggatgcccacatcggtacgaatgcgaggaatccttcacaactctg
aatgtagatataagaaatcaccaaaatcttcttgattctttggaacagtatgtcaaagga
gatttgctggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggttgataca
gtgaaacgcttgttgattaagaagttgcctccagttcttgcaatccagttgaagcgattt
gattatgactgggaaagggaatgtgcaatcaagttcaatgattattttgaatttccacga
gagctggacatggagccttacactgtggcaggtgtagctaaattggaaggagatgatgta
aatcctgaaaatcagataatacaaaatgaacagtctgaaaatgaacactctgggagcaca
aaatacaggcttgttggtgtacttgtgcacagtggccaggccagtggtggacattactac
tcttatattatccagaggaatggtggagatggtgagaaaaatcgttggtataaatttgat
gatggagatgtgacagagtgtaaaatggatgatgatgaagaaatgaaaaatcagtgtttt
ggtggagaatacatgggagaagtatttgatcacatgatgaagcgtatgtcctacaggcgc
cagaagaggtggtggaatgcttacattcttttttatgaacgtatggacacactagacaaa
gacaatgaactaataaaatatatttcagaacttgctatcaccactaaaccccatcagatt
aaaatgccatcagccattgaacgaagtgtacggaagcagaacgtgcagttcatgcataat
cgtatgcagtacagcctggaatacttccagttcataaagaagttgcttacttgtaatagt
gtctacttaaatcctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcacacaaagaaa
atagtccgtggccctgctagtgattggtatgatgcattgtgcatccttcttcgtcacagc
aagaatgtacgcttttggtttgcacacaatgtcctttttaatgtttcaaaccgcttctct
gagtatcttttggaatgccctagtgcagaagtgagaggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagatggaccatgtccttcaccttttgcctctcctgga
ccttccagtcaggcttatgataacttgagtttaagtgatcacttactccgagcggtacta
aatcttctaagaagggaagtatctgaacatgggcgccacttgcagcagtatttcaatctg
tttgtgatgtatgctaatctaggtgtagcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgcttgtggctctggatgaaggtccaggccctccaattaaataccag
tatgctgaactggggaagctatacactgttgtgtcacaactgatccgttgctgcaatgtg
tcatcacggatgcagtcttctatcaatggtaatcccccacttgccaacccttatggtgat
cctaatttatctcaacctataatggcacttcagcagaatgtagcagacattttgtttgtg
agaactagttatgtgaagaaaattattgaagattgcagcaattctgaagagaccatcaaa
ttgcttcgtttctgctgttgggagaatcctcagttctcttccactgtcctcagtgaactt
ctttggcaggttgcatattcatatacatatgagcttcgaccttacttggatctgctcctc
caaatcctattaattgaggactcttggcaaactcacaggattcacaatgcacttaagggg
atcccggatgacagggatggactatttgacaccattcagcgctctaagaatcattatcag
aaaagagcttaccagtgtataaagtgcatggtagctctcttcagcaactgtcctgtagcc
taccagatccttcagagcaatggagatttgaaaagaaaatggacctgggcagtagaatgg
cttggagatgagcttgagcgcagaccatacactggcaatccccaatacacctataataat
tggtctccaccaatacaaagcaatgaaacatcaaatggctacttcctggagagatcacac
agtgctaggatgactcttgcaaaagcttgtgaactctgcccagaggaggaaccagatgac
cctgatgccccagatgaacatgagtcttctccacctgaagatgccccactgtatccccat
tcacctggttcccagtatcaacagaataaccacgtgcatggacagccatatacaggcccg
gcagcacatcatatgaacaaccctcagcgaactggccaacgagcacaagaaaattatgaa
ggcagtgaagaagtttccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
