Chaetura pelagica (chimney swift): 104391167
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Entry
104391167 CDS
T08631
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104391167 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104391167 (SUPT6H)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104391167 (SUPT6H)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104391167 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
Spt6_S1
HHH_3
S1
HHH_9
SH2
Tex_YqgF
Tex_N
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
104391167
NCBI-ProteinID:
XP_009998704
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
WQWDEKWTQLKIRKQNLTRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKDVQS
MDELKDVYNHFLLYYGRDIPKMQNAAKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPEL
KQASRRDMYTICQAAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVC
SQFPSPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKVNISPTKKGKKDIDEAHYAY
SFKYLKNKPVKELRDDQFLKMSLAEEEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYR
DEFSHQVQEWNRQRTMAIERALNQFLYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKV
SSYRPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDNPVFCALVNGEGEVTDFLRLPHFT
KRRNAWREEEREKKAQDIETLKKFLLNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQ
QLSSVGVELVDNELAILYMNSKKSENEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDE
DILCLKLHPLQEHVVKEDLLNALYCEFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPR
KGTHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDG
SRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQG
YGDKHITLYDIRAELSCRYKDLRTPYRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIA
HRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNG
VAGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKL
PKDTYYDFDSEAADHKQEEDLKRKQQRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDV
IIRPSSKGENHLTVTWKVNDGIYQHVDVREEGKENAFSLGSTLWINTEEFEDLDEIVARY
VQPMASFARDLLNHKYYQDCNGGDKKKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLG
YQPRGKPRIEYVTVTPEGFRYRGQVFPTXXXXFRWFKDHYQDPVPGITPSSSSRTRTPAS
INATPANINLADLTRAVNALPQNMTSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSG
GGSSAYHVFTTPAQQPVATPLMTPSYSYTTPSQPITTPQYQLQANTTPQSTQSQSQPSSS
SRQRQQPKTNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPRPSPSPMIESTPMSLAGDA
TPLLDEMDR
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
tggcaatgggatgagaagtggacccagctgaagatccgcaagcagaacctgacgcgcctg
tttgagaagatgcaggcctaccagtatgagcagatctctgctgacccagacaagcccttg
gcagatggaataagggccctggatactactgacatggagaggctgaaggatgtgcagtcc
atggatgagctgaaggatgtgtataaccacttcctgctgtactatgggagagacatcccc
aagatgcagaatgctgccaaggctgcaagaaagaagcaaaagcggatccgggaagatggg
gaagaggaggaaggtgaaggggaggatgctgaggatgatgagcagaaggggcctgagctg
aagcaggcctcccggagggacatgtacaccatctgccaggcagctgggctggatggcctg
gccaagaagtttggtctgacacctgaacagtttggagagaatctgcgagacagttaccag
cgtcacgagacagagcagttccctgcagagcccctggagctggccaaggattatgtgtgt
agtcagttcccaagccctgaagctgtgctggaaggagcccggtacatggtggctttgcag
atagccagggagcctttggtcaggcaggtcctgagacagactttccaggaaagagccaaa
gtcaacatttcaccaaccaaaaaggggaagaaggatattgatgaagcccactatgcctac
tcctttaaatacttgaagaacaagcctgtgaaggagctacgagacgaccagttcctgaag
atgagcctggcagaggaggagggactgctcactatagatatcagcattgacatgaaagga
gtggagggttatggaagtgaccagacctactttgaggagatcaaacagttctattaccgg
gatgagtttagccaccaggtgcaggagtggaaccggcagcgaaccatggccatcgagcgg
gccctcaaccagttcctctacgtgcagatggctaaagagttgaagaacaagctgttagtg
gaggccaaagagtatgtcctgaaggcttgcagcaggaagctgtacaactggctgaaggtt
tcctcgtaccgccccgatcagcaagtggaggaagatgatgatttcatggatgaaaaccaa
gggaaggggattcgggtgctaggcattgcattctcctcagccagggacaacccggtgttt
tgtgccctggtgaacggggagggggaggtgacagacttcctgcgcttgccacatttcacc
aagagaaggaatgcctggcgtgaggaggagagggaaaagaaggcccaggatattgaaacc
ttgaaaaaattcctcctgaacaagaagcctcacgtggtgacgattgcgggtgagaacagg
gatgctcagatgctgatggaggatgtaaagagaattgttcatgagctggaccaggggcag
cagctgtcctctgtcggagtggagctggtggacaatgagctggccatcctctacatgaac
agcaagaagtctgagaacgagttccgggattacccgccgctgctgcgtcaggccgtctcc
ctcgctcgccgcattcaggacccgctcattgagtttgctcaggtctgcagctctgacgag
gacattctctgcctaaaactccaccctctgcaggagcacgtggtgaaggaggacctgctc
aatgccctctactgcgagttcatcaaccgagtcaacgaggtgggagtggatgtcaacagg
gccattgcccaccctcacagtcaggctttgctgcagtatgtctgtggcctgggaccacgc
aaaggcactcatctgctaaagatcttaaaacaaaacaacacacgtttggagaacaggacc
cagctggttacaatgtgccacatgggacccaaggtgtttatcaactgtgctggcttcatc
aaaattgacacggcgtcactgggcgacagtaccgattcctacattgaggtcctagatggg
tccagagtccatcctgaaacctatgaatgggcaagaaaaatggcagtggatgccttggag
tatgatgagtcagcagaggatgccaatcctgcaggagctctagaggagatcttggaaaac
cctgaacgtctgaaagacctggatcttgatgcatttgctgaagaactggaaagacagggc
tatggtgacaagcacatcactttgtatgacatccgagctgagctaagctgcagatacaag
gacctgaggacaccgtaccgttccccgaacactgaagaggtcttcaatatgctgaccaaa
gagactccagagaccttttatataggtaaaatgatcatctgcaacgtgactgggatagcc
cacaggaggcctcagggagagagctacgaccaggcgatacggaacgacgaaactggcctt
tggcagtgtcctttctgtcagcaggataacttcccagagctcagcgaggtttggaaccac
tttgacagtggttcctgcccaggtcaggccattggagtgaagacacgtctggataatggc
gtcgctggcttcatcccaacaaaattccttagtgataaggtggtcaagaggccagaagaa
agggtgaaggtgggaatgaccgtgcactgcaggattatgaagattgacattgagaagttc
agtgcagacctgacctgcaggacttcagacttgatggataagaacaatgagtggaaactg
cccaaagacacctactatgactttgactcagaggcagcagatcacaaacaggaagaagac
ctgaaaagaaagcagcagcgaacaacatacatcaagagggtaattgctcatccatcattc
cacaacattagcttcaagcaagctgagaagatgatggagaccatggaccaaggggatgtg
attattcggccgagcagcaaaggagagaaccacctgactgtcacctggaaggtgaacgac
gggatttaccagcacgtggatgtccgagaggagggcaaggagaatgccttcagcctgggc
tccacactttggattaacacagaggagtttgaagacctggatgaaattgtcgctcgctat
gtccagccaatggcttcttttgccagagacctgttgaatcacaaatactatcaggactgc
aacggtggagacaagaagaagctggaagagctgctgataaagaccaagaaagagaagcca
acatttattccctactttatcagtgcctgtaaagatctacctggcaaattcctcttggga
tatcagcctcgaggcaaaccaaggatagagtatgtgacagtgacaccagaaggattccgg
taccggggccaggttttccccacnnnnnnnnnnntcttccgatggtttaaggatcattat
caggaccctgttccaggtattacccccagcagcagcagtcggaccaggactccagcctcc
attaatgctactccagcaaacatcaacctggcagacctgacccgagcagtgaacgctctc
ccacagaacatgacctcccagatgttcagtgccattgctgctgtgacaggccagggacag
aaccccaatgccacccctgcccagtgggcatccagccagtacggatatggaggcagcgga
ggcggcagcagtgcctaccacgtcttcacgactccagcacaacaaccagtggccacccct
ctgatgacccccagttactcctacactactcccagccagccgattacaacgccccagtac
cagctccaagccaacaccacaccccagtccacccagtcccagtcgcagccatcctccagc
tccaggcagaggcagcagccaaagaccaacagccacgctgccatcgactgggggaagatg
gccgagcagtggctgcaggagaaggaggctgaaaggaggaaacagaagcagaggttgacc
ccccgcccgtcccccagccccatgattgagagcacccccatgtccctggccggggacgcg
acgccgctgctggacgagatggaccgatag
DBGET
integrated database retrieval system
