Cucurbita pepo subsp. pepo (vegetable marrow): 111776777
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Entry
111776777 CDS
T05351
Name
(RefSeq) cyclin-T1-3-like
KO
K15188
cyclin T
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111776777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111776777
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
111776777
Brd4/P-TEFb complex
111776777
7SK RNP complex
111776777
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
Cyclin_C_2
DUF2099
Motif
Other DBs
NCBI-GeneID:
111776777
NCBI-ProteinID:
XP_023511903
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Position
LG16:7303287..7310120
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AA seq
519 aa
AA seq
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MDMNMENLSSSDPSHQAMYENSDSKHSQDGLEDGSQWYFSRRELEENSPSKQDGIDLKKE
AYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKV
EETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVH
HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVK
LPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPSGEADGSIGGGPSNQTSIKAPSN
SEERAVADNHALGAGLATSRLGTSKASSSRPASEHSFAGDQPSRAMRNHSIESSNVDFRN
PSNHNTGSESKVRQEMETSAFHDKGNAQNSLRHQSEGLVGQDHGNDMKSKETTRDSMELK
DKHVIRNTDLREGTLGKSQDAIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERE
LEAGVEMAAGSEKNKREQRQSWSKSSNKQEYDDSYQDSH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaatatggagaatttatcatctagtgatccgtcgcatcaggcgatgtatgaa
aatagtgattcgaaacactcacaggatgggttggaggatggttctcaatggtatttttct
aggagggaattagaagaaaattctccttctaaacaagatgggattgacttgaaaaaggag
gcatatctacgcaaatcgtactgtacattcctccaagatttgggaatgagacttaaagtt
ccccaggtaaccattgctacagcaataatattttgtcataggttctttcttcggcagtct
catgcaaagaatgaccgaaggacaattgcgacagtgtgtatgtttctcgcaggaaaggtt
gaagaaaccccgcgtccattgaaggatgttattatggtctcatatgaaatcatcaacaag
aaggatcctactgcagcccagaaaattagacaaaaggaggtgtatgaacggcaaaaagag
ttaattttacttggggagagggttgttctcgcaactcttggttttgatcttaacgtgcac
catccctacaaacccctcgttgaggcaattaaaaaattcaaagttgctcaaaatgccttg
gctcaagtagcttggaatttcgtcaatgatggattgcggacatctctttgcttgcaattt
aagcctcaccatattgcggctggtgccattttccttgctgccaaatttctcaaagttaaa
ctcccatcagatggggaaaaggtgtggtggcaagagtttgatgtcaccccacggcaattg
gaggaagtcagcaaccaaatgttagagctttatgaacagaatcgattgccttctggtgaa
gctgatggaagcattggaggtggtccttccaatcaaacctcaataaaagctccctcgaac
agcgaagaacgtgctgtagcggacaatcatgcacttggtgcgggtcttgctacttcaaga
cttggaacctcaaaagctagttcatctaggccagcttctgaacactcatttgcaggtgac
cagccatcgagagcaatgcggaatcatagtatcgaaagttcgaatgtagattttagaaac
ccttccaatcacaatacaggtagtgaatctaaggttagacaggagatggagacatcggct
ttccatgacaagggaaatgctcaaaactcgctaaggcatcagtctgagggattggttggg
caagaccatggaaatgatatgaaatcaaaggaaacaacaagggattcaatggaactgaaa
gacaaacatgtaattcgaaatacagatcttagagaaggtacactcggtaaatctcaggac
gctatcaaaaagatcgacaaggacaaagtaaaggctgcactcgaaaaacgaaggaagtct
ctcggcagcatgacccagaaaaaagaattaatggatgaagatgatctgattgaaagggag
ttggaagctggtgttgagatggctgctgggagtgagaaaaacaagcgagaacagaggcaa
agttggagtaagtcatcgaataaacaagaatatgatgattcatatcaagacagtcattga
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