Cucurbita pepo subsp. pepo (vegetable marrow): 111785302
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Entry
111785302 CDS
T05351
Name
(RefSeq) DNA mismatch repair protein MSH4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111785302
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111785302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_22
T2SSE
AAA_27
Motif
Other DBs
NCBI-GeneID:
111785302
NCBI-ProteinID:
XP_023521478
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MEDDGGERSSYVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
VILVPPNKLAPDGMVGVSVLVDRFYVTVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLTVTFNGSSDHVSIDATSVHNLEIIEP
LHSNLWGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIILLKTSLEAL
PLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQCFAV
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDVQGK
LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL
LAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPILESIHNDFVANSI
FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTED
SLESNSSTFMTEMKETAFVMQNVSHRSLVVVDELGRATSSSDGFAIAWSCCEYLLSLKAY
TIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
PSSVIETAKNITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKHSSHDEDSIREAL
QNLKEGYINGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggaggcgagagatcgagctacgtgatcggtctgatcgagaacagagct
aaggaggttggagttgctgcgttcgatttgagatcagcttcacttcatctttctcaatat
atagagaccagcagctcctaccagaatacaaaaactttgctgcatttctatgatccaatg
gtgattctagttcctcccaacaagctcgcacctgatggcatggttggagtttctgttttg
gtagacagattttatgttacagtgaagaaggttgtaatggctcgtggttgctttgacgac
acaaagggtgctgttttgattaagaatctggcagccaaggagccttctgctcttggtttg
gaaacttattacaaacagtactatctctgcttggctgctgctgctgctagcattaaatgg
atagaagcagagaagggggttattgtgaccaatcactctttaacggtcacatttaatggt
tcatctgatcatgtgagcattgatgcaacgagtgttcacaatttagaaattattgagcca
cttcactccaacctttggggaacaagcaacaagaagagaagtctgttccacatgctcaag
acaacaaaaactataggagggtctagacttcttcgtgccaatcttttgcagccattaaaa
gatattgaaaccattaatgcccgtctggattgcctggatgaactgatgagcaatgaacaa
ctgttctttgggctctctcaagctctccgtaaatttcctaaagagaccgatagagtactt
tgccacttctgcttcaagcaaaagaaagttaccaatgaagttttgggtgctgataatgct
aaaaagagccaaagtttaatatctagcattattctgctgaaaacttctctcgaggcattg
cctttactttcaaaggtgcttaaagaagcaaagaattttcttcttgcaaacatctacaat
tctgtttgtgaaaatgaaaaatttgcaaccattagaaggaggattggggaggttatcgat
gaggatgttcttcatgctagggttccttttattgcccgcactcagcagtgttttgcggtc
aaggctggaattgatggactgcttgatatcgcaagaaggactttctgtgatactagtgaa
gcaatacataatcttgctaataaataccgagaggagtacaagctgcccaatttaaaactg
ccatttaacaatagacaagggttttacttgagcattcctcggaaagatgtacaaggcaag
cttcctagcaagtttattcaggtcttgaagcatgggaacaatatacgatgctctactctg
gaacttgcttctctgaatgttagaaacaagtctgcagcaggagaatgctatatacggaca
gaaatttgcctggaaggactggtagatgccataagagaggacgtctctatgctcacactg
cttgcagaagtcttgtgtctcttagatatgatggttaattcttttgcacatacaatatct
tcgaagcctgtggatagatatactaggccaaattttacagaaagtggcccgatggcaatt
gaagctgcgagacacccaatcctagaaagtatacacaacgattttgttgctaacagtata
tttctatcggaagcatcaaacatgataattgtcatgggcccaaatatgagtggaaagagt
acctaccttcaacaaatgtgccttctagttattcttgctcagattggatgttatgttcca
gcacaattctcaaccttgagagttgttgatcgtatattcacaagaatgggcacagaagat
agtctagagtccaactccagcacattcatgacagagatgaaggaaacagcttttgtgatg
cagaatgtctcccataggagtctcgttgtcgtggatgaacttgggagggcaacatcttct
tccgatggatttgcaattgcatggagctgctgcgaatatcttttatcactgaaagcctat
accatatttgccactcatatggacggcctatcagaactagtaaccatctatccaaacgta
aaaattcttcactttcatgttgatataaggaataaccgtttggatttcaagtttcaacta
aaggatggaattagacatgtaccacactatggccttctattagcagaagtggcaggactg
ccaagctcagttattgaaactgcaaaaaacattacttccaggatcatggaaaaggaagaa
agacggatggagataaactacttgcagtaccatcctattagaatggcttataatgtagct
cagcggttgatttgtttgaaacattccagtcatgatgaggattcaatccgagaagcatta
caaaaccttaaagaagggtacataaatgggaggctatga
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