Cucurbita pepo subsp. pepo (vegetable marrow): 111801997
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Entry
111801997 CDS
T05351
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111801997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111801997
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Target recognizing subunit
111801997
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
MIOS_WD40
Aldo_ket_red
PROPPIN
Sigma54_activat
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
111801997
NCBI-ProteinID:
XP_023542361
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Position
LG01:complement(19455344..19457990)
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AA seq
472 aa
AA seq
DB search
MDSPQAKKSGLNLPAGMAERSLRLESSSGSFRAISSLSSPSKTSTCSDRFIPCRSSSRLH
TFGLIEKGSPVKEGANEAYSRLLKSELFGSDFGSFSPAGSQGQGSPMSPSKNMLRFKTEH
STPNSPSIFGQDAGYSSETSTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNTLA
VGLGTCVYLWSASNCKVTKLCDLGPNDGVCSVQWTREGSYISIGTNLGQVQIWDGSQCKK
VRTMGGHQTRTGVLSWNSRILASGSRDHNILQHDLRVSSEFVNKLVGHKSEVCGLKWSND
DRELASGGNDNQLLVWNQHSQQPVLRLTEHTAAVKAIAWSPHQSGLLASGGGTADRCIRF
WNTANGHQLECVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMGKVATLTGHTM
RVLYLAMSPDGQTIVTGAGDETLRFWNIFPSMKTQTPVRDTGLWSLGRTQIR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggattcacctcaagcgaaaaaaagtgggctaaatcttccagctggaatggctgaaagg
tcgcttcggctcgagtcgtcatcgggttcttttcgagcgatatcgagcttgtcgtcacct
tcgaaaacctcgacttgtagtgatagattcataccgtgtagatcgtcgtcgaggctacac
acatttgggctgattgaaaagggttcccctgtgaaagaaggcgcaaatgaggcgtattcc
aggttgttgaaatcggagctttttggatctgattttggttctttttcccctgcaggttca
caaggccaagggtcgcctatgagccccagcaagaacatgctgaggttcaagactgaacat
tctaccccaaattccccttctattttcggtcaagatgcggggtattcctctgaaacctca
acccctccaaagccacctcgaaaggttcccaagaccccacataaggttctggatgctcca
tcgcttcaagatgatttttacttgaatcttgtggattggtcctcgcagaatacattggct
gttggacttggaacttgtgtttacttatggagtgcatcaaattgcaaggtgactaagtta
tgtgatttgggacccaatgatggtgtatgctcagtccaatggaccagagagggttcctac
atatcgattggaaccaatcttggtcaagttcagatatgggatggaagtcagtgcaagaaa
gttagaaccatgggaggacatcaaacaagaacaggtgttttgtcgtggaattctcggatt
ttagcatctggaagcagagaccataacattcttcaacatgatctccgggtttctagtgag
tttgtgaacaagctcgtcggccataaatctgaggtttgtggacttaaatggtcaaacgac
gacagagagcttgcctccggtggaaatgacaatcagcttttggtatggaatcagcattct
cagcagcctgtgttgagactaactgagcacacagctgctgttaaggccattgcttggtca
ccccaccaaagtggtcttcttgcatcaggtggtggaactgctgatcgatgcattcgtttc
tggaacactgcaaatggacaccagttggagtgtgtcgacactggaagccaggtttgcaat
ctggcatggagtaaaaatgttaatgaacttgtgagtacacatgggtattcccagaaccag
attatggtgtggaagtatccatcaatgggaaaggttgctacactaactggacatacaatg
agggtgctgtaccttgcaatgtctcccgacggtcagacaatagtaacaggtgcaggagat
gaaactcttcgtttctggaatatcttcccatcaatgaaaactcagacaccagtcagagat
acgggcctgtggtctctgggacgaacgcaaattcggtga
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