Cucurbita pepo subsp. pepo (vegetable marrow): 111803844
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Entry
111803844 CDS
T05351
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
KO
K14963
COMPASS component SWD3
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111803844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111803844
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
ATAC complex
111803844
NSL complex
111803844
HMT complexes
COMPASS/SET1 complex
111803844
COMPASS/SET1 complex (yeast)
111803844
MLL-HCF complex
111803844
MLL3/MLL4 complex
111803844
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111803844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
eIF2A
WD40_like
RMC1_N
PROPPIN
PALB2_WD40
DUF5888
Big_7
Caudo_bapla_RBP
Motif
Other DBs
NCBI-GeneID:
111803844
NCBI-ProteinID:
XP_023544202
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Position
LG10:complement(3042662..3045029)
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AA seq
316 aa
AA seq
DB search
MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTLTP
LHEFQGHEQGVSDLAFSSDSRFLVSASDDKTLRLWDVSTGSLIKTLNGHTNYVFCVNFNP
QSNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTGVDFNRDGSLIVSSSYDGLCRIWD
ASTGHCVKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHANSK
FCIASTFSVTNGKYIVSGSEDNCVYLWELQTREIVQKLEGHSDTVISVSCHPSENLIASG
ALGNDKTVKIWTQKKD
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggagccatctcaatcagattcctataaaccttacactctgtcccaaacccta
actggccacaagcgggcgatttcatccgtcaaattctcagcggatggccgtcttcttggc
tcctcctccgccgataagacccttcgcacttattcctgctcaaattctactctgacccca
cttcatgaattccaaggccatgaacagggtgtctccgacttggctttctcctccgattct
cgttttcttgtgtccgcctctgacgacaagactcttcgcctttgggatgtctctactgga
tcccttatcaagacgctcaatggccatactaactatgtgttctgtgtcaacttcaatccc
caatccaacatgattgtgtctggctccttcgatgagaccgtccgcatttgggacgtcaaa
tctggcaagtgtcttaaagtccttccggcccactctgatcctgtcactggcgtggatttc
aatcgtgatggctcgctgattgtttcgagtagctatgatgggctgtgccgaatttgggat
gcctctaccgggcattgtgtgaaaactttgattgatgatgaaaacccacctgtttctttc
gtcaagttctcccccaatgggaaatttattcttgttgggactttagataatactttgaga
ttgtggaacttctctactggaaaatttctgaaaacttacacaggccatgctaactcgaaa
ttctgcatcgcctccaccttttctgtgacaaatggaaagtatatcgtgagtggttcagaa
gacaattgtgtgtatctatgggaactgcagaccagggaaatagttcagaaactagaaggt
cactctgacacagttatatcagtatcttgtcaccccagcgagaacctgattgcttctgga
gcactgggcaatgataaaactgtgaagatctggacccagaagaaagactag
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integrated database retrieval system