Cucurbita pepo subsp. pepo (vegetable marrow): 111805336
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Entry
111805336 CDS
T05351
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpep01002
]
111805336
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111805336
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111805336
Peptidases and inhibitors [BR:
cpep01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111805336
Ubiquitin system [BR:
cpep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111805336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
111805336
NCBI-ProteinID:
XP_023546136
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All DBs
Position
LG11:complement(2797075..2804512)
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AA seq
1116 aa
AA seq
DB search
MLVAWDLGFQSLVLAACLVFPVIVLVIRHKWRLGMARKEEINWLLVLASEEAAKIEHEAS
FGYIPAPVSLNLHCALCFSPTTTRCARCKAVRYCSGHCQIIHWRQGHKDECHPPKTSDWS
SEKEKDSEDKLAVQSHSGSRGKKIDTDNGQHVEPDKILNDKLTPPDSGYSSHSPSQKDVS
VKLHADEEENSTSELPDTNLYEFHSSTLNTESSDDVFVSENESVSSSPRSDGYSSAQNSF
AKDNSTSRVSIVGPNKPLSPNYAHFVNSVDKFAKLKTESQPVVTGIGTDYDTPSRAAKVR
GIGGSCEAASSNFQYTNGNSTGAKCDFHEDSVPSSINGANSRNDSGNHSLLRFSFSLSGG
TSQSKAQVAQVAQVAQVNENVADGNLPPTLGISKTSENTLLTDIKAESLKVRHSPSSCKG
SQDIDNTAKKLSDRPVVSSMLSSSTCINPFPVASKSESSNVRDSNTSMSVPLKSERSGPV
FIEPGDAPSISKHCGHGYLVDDSSVHLPSSIGRDPVPPIHSRKIGAIQVGAGISSLDVNL
LSKPVYGFRPFAPNELRKSNSVRGYVANGNGNTGKHNNKGDFPYELFINLYNWNKVELQP
SGLVNCGNSCYANVVLQCLTFTPPLTAYFLQGLHSKACAKERWCFTCEFESLVLEAKEGK
SPLSPLRIISRLKKIGSQLVNGKEEDAHEFLRCAIDTMQSICFMEAQAGRSGPVEEETTL
IDLTFGGYLLSKIKCTRCENKSERIERILDLTVEISGDIETIEEALQQYTNPEVLDGDNR
YQCSRCKSYVKAKKRLSILEAPNILTIALKRFQSGKFGKLNKPVIFSEILDLAPYMSSRS
DKSPVYRLYGVIVHLDVMNAAFSGHYVCYIRNNQNKWFKIDDSTVTAMDLENVLTRGAYM
LFYARCSPRAPRLIRSKIMTDSKDGSIPSWINGRSSSSKSSPNATYPDSRNLHTKINTSN
DPSNISSFYRKFHQLQKLMDEDLSSDNSSLLSNSDETSCSTNSSSDSTNTDDLPEFIYSD
SGCSWNGFHNASDIDASLPSSSSSSPLLHPAHSSQCSPVGPKTTEKPHLNLSSRKESNCW
EETVHLMEGKDGVWLHSDRSRQGRNVVSNGSWRRER
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcgcttgggatttagggtttcagagccttgttcttgcggcgtgtttggttttt
cccgttattgttcttgttattcgtcacaaatggcggcttggtatggcgaggaaggaagag
atcaactggctattggtcttggcgtcggaggaagctgctaagattgaacatgaggcttcg
tttgggtacattcctgcgccggtttctctgaatcttcactgtgctctttgtttcagtccc
acgactacgcgttgcgctcgttgtaaagcagttcgatactgttctggtcattgtcaaatt
attcactggcgtcaaggtcataaagacgaatgccacccaccgaaaacgtccgattggtct
tcggagaaggaaaaggattccgaggacaagttagcagtccaatcccactctggaagccgt
ggcaaaaaaattgatactgacaatggtcaacatgtagaaccagataagatcttgaatgat
aaacttacaccaccagactctggctactctagtcatagtccaagtcaaaaggatgttagt
gtgaagttgcatgcagatgaggaggaaaattcaacttcagaattaccagatactaattta
tatgaattccattcttctacattaaacactgaatcatctgatgatgtgtttgtgagtgag
aatgagagcgtgtccagttccccacgatctgatggatattcgtctgctcaaaattccttt
gccaaggataattctacatccagagtatcaattgttggcccaaacaagccattatctccc
aactatgctcactttgtaaactctgtagataaatttgctaaactgaaaactgaaagtcag
cccgtagtcactgggattggaacagattatgataccccttcaagggctgctaaagttaga
ggtataggtgggagctgtgaagctgcttcttccaattttcaatatactaatggaaattct
actggggcgaaatgtgattttcatgaagactctgtcccatctagtattaatggtgccaac
agcagaaacgattcaggaaatcattcgttactgcgtttttcattcagcttatctggaggt
acttctcagtccaaagcacaagtagctcaagtagctcaagtagctcaagtaaatgaaaat
gtagccgatggtaatcttcctcctactttggggattagcaaaactagtgaaaatactttg
ctaacagatatcaaggcagaatctttaaaggttagacattccccatcaagctgcaaaggc
tctcaagatatagataacactgctaagaaattgtcagatcgacctgtagttagctccatg
ttatcttcttccacttgtatcaatccgtttcctgttgcttctaaatctgaatcaagtaat
gttcgtgattcaaatactagtatgtcagtacccttgaagtctgaaaggtcgggccctgtt
ttcatcgagccaggtgacgcaccgagtatttcaaagcattgtggccatggatatttagtg
gatgattcaagtgttcatttgccttcaagtattggaagggacccagttcctccaattcat
tctagaaaaattggtgccatacaagttggtgctggcatttcctctctggatgtgaactta
ttgtcaaagccagtttatggcttcagaccttttgctcccaatgagcttagaaaatctaat
tcggttcgtggttatgtagctaatggcaatgggaatactggaaaacacaataacaaggga
gactttccatatgagctttttatcaacctatataattggaataaagtggagctccaacca
tctggccttgtcaactgcgggaacagctgttatgcaaatgtagtactccagtgtttgaca
ttcactcctcctttgacagcctattttcttcaggggctgcattctaaagcatgtgccaag
gagagatggtgttttacctgtgagtttgaaagtctagtacttgaggcaaaagaaggcaaa
tctccactatctcctctcagaataatttctcgactgaaaaaaattggaagtcaacttgtc
aacggaaaagaggaggatgcgcacgagtttttgaggtgtgctattgacacaatgcaatct
atttgctttatggaagctcaagcaggtcgatcaggccccgtggaagaagaaacaactcta
atcgaccttacatttggaggttatcttctatcaaagatcaaatgcacaaggtgtgagaac
aaatccgaacgaatcgaaaggattttagatcttactgttgagataagtggggatattgaa
acaatcgaagaggcccttcaacaatatacaaaccctgaggttttagacggggacaataga
taccaatgtagcagatgcaaatcttacgtgaaagcgaagaaaaggctatcaatattggag
gctcccaacatcctgaccatagcattaaaacgattccagtcaggcaaatttgggaagctg
aataagccggttattttttcggaaatcctagatttggcaccctatatgagtagcagaagt
gataagtcccctgtatacaggctttacggagtgattgttcatttggatgtcatgaatgcc
gcattttctggtcactatgtgtgctatatcaggaataatcaaaacaagtggttcaagatt
gatgatagcacggtaacagctatggatcttgaaaatgtactaacaagaggggcatacatg
ctcttttatgcaagatgctcacctagggccccaaggctaataagaagcaaaattatgact
gattccaaagatggaagcatcccatcttggatcaatgggaggagtagctcatctaaatca
agtcccaacgccacataccccgattcccggaaccttcataccaagatcaatacatcaaac
gatccttcaaatatcagttcgttttatcgaaaattccaccagctccagaagctcatggac
gaggacttatcgagcgacaattcttctcttctcagtaactctgatgaaacttcatgcagt
actaacagcagcagtgactccacgaacactgacgacttaccagagtttatttacagcgat
tctggatgcagttggaacggttttcataatgcttctgatatagatgcatcgttaccatcc
tcgtcttcgtcctccccacttttgcatccagctcattcgagccaatgctcacccgttggt
cctaaaacaacagagaaacctcatctcaatctctcgagtaggaaagaatctaactgttgg
gaagaaactgtgcatttgatggagggtaaagatggtgtttggttgcattctgaccgtagc
agacaaggtagaaatgtagtgagtaatggtagttggagaagagaaaggtaa
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