Cucurbita pepo subsp. pepo (vegetable marrow): 111805816
Help
Entry
111805816 CDS
T05351
Name
(RefSeq) 4-coumarate--CoA ligase 2-like
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00130
Ubiquinone and other terpenoid-quinone biosynthesis
cpep00940
Phenylpropanoid biosynthesis
cpep01100
Metabolic pathways
cpep01110
Biosynthesis of secondary metabolites
Module
cpep_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
cpep_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
111805816
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
111805816
Enzymes [BR:
cpep01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
111805816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
111805816
NCBI-ProteinID:
XP_023546819
LinkDB
All DBs
Position
LG11:3542362..3546764
Genome browser
AA seq
542 aa
AA seq
DB search
MDSQLTNAQDFIFRSKLPDIYIPNHLPLHTYCFQHLSQFHHRPCLINAATGQIHTYAAVD
LAARRVATGLSKIGVGQGDVIMLLLQNSPEFVFAFLGASYAGAISTTANPLYKPAEIKKQ
AATARPKVIITQAEFVEKVREFALENGVKIICTDSPPVGCLRFSEILEADENEIPAVKIN
SNDVVALPFSSGTTGVPKGVMLTHKSLVTSIAQQVDGENPNVDLNSNDVLICLLPLFHIY
SLNSVLLCGLRVGAAILILQKYDMSSLLRLIQTHKATIAPFVPPIVLDFAKNPDIHRYDL
SSIRIVMSGAAPMGKALEDTVKARLPNATLGQGYGMTEAGPVLSMCLGFAKEPFEFKSGA
CGTVVRNAEMKIIHPETGVSLPRNHPGEICIRGSQIMKGYLNNKEATEKTIDKNGWLHTG
DLGFIDDDDEIFIVDRLKELIKYKGYQVAPAELEALLTSNPNVSSAAVVPMEDEAAGEIP
AAFVVRTEGSKISEDDIKKYISDQVIYYKKIRKVLFVDSIPVAPSGKILRKVLKAQLESG
AF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaacttaccaacgcccaggatttcatcttccgatcaaagctccccgacatc
tacatcccaaaccacctccccctccacacctactgcttccaacacctctcccaattccac
caccgcccctgcctaatcaacgccgccaccggccaaatccacacctacgccgccgtcgac
ctagccgccagacgcgtcgctaccggtctaagcaagatcggtgtcggacaaggcgatgtc
ataatgcttctactacagaacagccctgaattcgtcttcgccttccttggcgcgtcctat
gccggcgccattagcaccaccgcaaacccattatacaagccggcggaaatcaagaaacag
gcggccacggcgaggccgaaggttataattacgcaggcggaatttgtggagaaagttcgg
gaatttgcattggaaaatggggtgaaaattatatgtacggattccccgccggtgggttgc
ctgagattctccgagatcttagaggccgatgaaaatgaaattccggccgtgaaaattaac
tccaacgatgtcgttgctcttccgttctcgtccggaaccaccggagttcctaaaggcgtt
atgctcacacacaaatctctcgttacaagcatcgctcaacaagtggacggagagaatcca
aatgtggatttaaacagcaacgacgtgcttatatgtcttcttccattattccatatctac
tctctcaattccgttctcctctgcggactacgtgtcggcgcggccattctcatcctccaa
aaatacgacatgtcgtctcttctccgcctaattcagacccacaaagccactatagccccc
ttcgtccctcccatcgtcttggacttcgccaaaaaccccgacatccaccgttacgacttg
tcgtccatcagaatcgtcatgtcgggtgctgcccccatgggcaaggccctggaagacact
gtcaaggcccgactccccaacgccacgcttggacagggatatgggatgacggaggccggt
ccggttctgtcgatgtgtctgggtttcgcaaaggagccgttcgagtttaaatcaggtgcg
tgcgggaccgtcgtaaggaacgctgagatgaagatcatacaccctgaaactggtgtatct
ttgccacgtaatcaccctggtgagatctgcatacgtggctcccagatcatgaaaggttac
cttaataacaaagaagccacagagaagactatagacaagaatgggtggctccacactgga
gacttggggttcatcgacgacgacgacgagatcttcatcgtcgatcgactgaaggaactg
atcaaatacaaaggatatcaagtggccccagctgagcttgaagctctcttgacttcaaac
cctaatgtttcttctgctgctgtcgtaccaatggaagatgaagcagctggagagattccg
gctgcatttgttgttagaactgaaggctccaagattagtgaggatgacatcaagaagtat
atttctgatcaggttatatactacaagaaaatcaggaaggttttgtttgtggactcaatt
ccagttgctccttcaggcaagatcttgaggaaagtgttaaaagctcaattggagagtggt
gccttttaa
DBGET
integrated database retrieval system
