Chitinophaga pinensis: Cpin_4709
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Entry
Cpin_4709 CDS
T00959
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpi
Chitinophaga pinensis
Pathway
cpi03030
DNA replication
cpi03430
Mismatch repair
cpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cpin_4709
03430 Mismatch repair
Cpin_4709
03440 Homologous recombination
Cpin_4709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpi03032
]
Cpin_4709
03400 DNA repair and recombination proteins [BR:
cpi03400
]
Cpin_4709
Enzymes [BR:
cpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cpin_4709
DNA replication proteins [BR:
cpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cpin_4709
DNA repair and recombination proteins [BR:
cpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cpin_4709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACU62146
UniProt:
A0A979G7J0
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All DBs
Position
5866910..5870554
Genome browser
AA seq
1214 aa
AA seq
DB search
MIFSHLHVHTQYSLLDGAADIKSLYKKAMASNQPALAITDHGNMFGAFQFVAEAYNNRLN
PEDPKDKRLKVKPIVGCEFYVVENRFKRAFTREEKDIRNHQVLLAKNDEGYRNLIKLCSL
GYIEGLYGKYPRIDKELILQYHKGLIATTCCLGASVPRAILKKGEEAGEEEFKWWLDIFG
EDYYVELQRHGIPEQEKVNESLIKFASKHNVKIIASNDSHYVDQADANAHDILLCINTGE
KKSTPTMKDFSDDDVSMKNKRFAFYNDQFYFKTTEEMTALFQDLPQAIDNTNEIVDKVEL
LDLKRDILLPNFPIPPPFLTQDQYLRHITMEGAHKKYAEVTAEVEERINFELSVIENMGF
AGYFLIVSDFIKAGRDLGVFIGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPERK
SMPDIDTDFDDEGRQKVIDYVVNKYGKNQVAQIITYGTMAAKMSIKDVARVMDLPLVESN
MLAKMVPDKPGIQLDRIFNAPIDEGEKSLAEKEGLGPEDLENVKRLRELIKGQDLQGEVL
REACVLEGSVRNTGIHAAGIIIAPKDLYDLIPVSTAKDSDLLVTQFEGSIIESAGVIKMD
FLGLKTLTIIKGALELIRTNHGIDISIDDIPLDDAKTYELYQKGETNATFQFESAGMQKY
LRELKPDRFDDLIAMNALYRPGPLEYIPLFIRRKHGLEETVYDLAEMEEYLNDTYGITVY
QEQVMLLSQKLANFSKGDADVLRKAMGKKQKAVLDKMKKQFMEGCAANGHDLKVCDKVWT
DWEAFASYAFNKSHSTCYAFVAYQTAYLKAHYPAEYMAAVLNNASNIEKITFFMEEAKRM
GIDVLPPDVNESFKGFAVNKQGQIRFGLAGLKGVGEAAVENILEERQKGSNYKNIFEMIK
RVNQRAVNKKSLEALAMSGAFDCFPELHRAQYFHKPDNDNTTGLDKIVKFGQQVSAGAAT
TMSSLFGADDMPEVEPPKIPPCDPWPLILKLNNEREVTGIYISGHPLDDYRFESRYYNMN
TVQELVEYQADLQAPGNAKSGRERNFRLAVYVTGAQERISRNNRQFGIMTIEDYSGKFEF
ALWSEDFIRFAPYLKTGLCLFINGGFKAKRFNDAEYEFKVNGIQLLQEVKKTHTKKVTLV
TMPKFITRELVDFLVDNINKYPGASELFLQLIDRDDAMQVKLHTFNKHIEMNDELAHFLS
KQPDIDTYIDTINK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgatcttttcccacttacacgttcatacacaatattctctgctggatggtgcggcagac
atcaaatcattgtacaagaaagccatggccagcaatcagccggcgctggccatcacggac
catggtaatatgttcggcgctttccagtttgtggcagaagcttataacaacagactgaat
cccgaagatccgaaggataaaaggctgaaggtaaaacctattgtcggctgcgagttctat
gtagtagaaaaccgcttcaaacgcgcttttacccgtgaagagaaagatatccgtaatcac
caggtcttactggcgaaaaacgatgaaggttaccgtaaccttattaagctgtgttccctt
ggttatatcgagggactgtacggtaaatacccccgtattgacaaagaactcattcttcag
tatcataaaggactgatcgccacgacctgttgtctgggcgcctccgtacccagggcgatt
ctcaaaaaaggagaagaagccggcgaagaagaattcaaatggtggctggacatcttcggg
gaggactattatgttgaattacagcgacatggcattcccgaacaggagaaagtgaatgag
tccctgatcaaatttgcgagcaaacacaacgtaaagatcatcgcctctaatgactcccac
tatgtagaccaggcagatgcgaacgcacacgacattctcctttgtatcaacaccggtgag
aagaagagcactcctaccatgaaggatttctctgatgacgacgtgtccatgaagaacaag
cgtttcgctttctataacgaccagttctactttaagacgacggaagaaatgacggcgctc
ttccaagatctgccacaggctattgataacaccaatgagatcgtggacaaggtggaactg
ctggatctgaagcgggacatcctcctgcccaacttccctattccaccgccattcctgaca
caggaccagtacctgcgtcatattaccatggagggtgcgcataagaaatacgcagaagtg
acggctgaggtggaagaacgtatcaattttgagctgagtgtaattgagaacatgggattt
gcgggctacttcctgatcgtatctgactttatcaaggcaggccgcgatctgggcgtattc
atcggtccgggccgtggttcggcggcaggttcggcggtagcttactgtattggtatcacc
aatattgacccgatcaagtataacctgctgtttgagcgtttcctgaatccggaacgtaag
agcatgcccgatattgatacggacttcgatgatgaaggccgtcagaaggtaattgactat
gttgtaaataaatatggtaaaaaccaggtagcacagatcattacttacggtaccatggcc
gccaagatgagtatcaaggacgtggcccgtgtaatggacctgccactggttgaatccaac
atgctggccaaaatggtacctgataaaccagggattcagctggaccgcattttcaacgcc
cctattgatgaaggcgaaaagagccttgcggagaaagaagggctgggtcctgaagacctt
gaaaatgtgaagcgactccgtgaactgatcaaaggacaggatctacagggtgaagtattg
cgggaagcctgcgtactggaaggatccgtacgtaacaccggtatccacgcggcaggtatc
atcattgcgccgaaagacctgtacgacctgatccctgtatctaccgccaaggactctgac
ctgctggtcacacagtttgaaggtagtatcatcgagagcgccggtgtaatcaaaatggac
ttcctgggtctgaagaccctcaccattatcaagggcgcccttgaactgatcagaaccaac
cacggtatagatatcagcatcgacgatattccactcgatgatgccaaaacatatgagctt
tatcagaagggagaaacgaacgccacgttccagttcgagtccgccggtatgcagaaatac
ctgcgcgaactgaaacctgaccgattcgacgaccttattgcgatgaacgccttgtaccgt
ccgggaccattggagtacattcctttgttcatccgtcgtaaacacggattggaagagacg
gtgtatgacctggcggaaatggaagaatacctgaatgatacctatggtattacggtatac
caggagcaggtaatgctactgagccagaaactggccaacttctccaaaggtgatgcggac
gtactccgtaaagcgatgggtaagaaacagaaagcggtactggataaaatgaagaaacag
ttcatggaaggttgcgccgctaacggccatgacctgaaagtctgtgataaagtatggacg
gactgggaggcattcgcatcctacgcgttcaacaaatcccactctacctgttacgccttt
gtagcttatcagaccgcttacctgaaagcgcactatccggcggagtacatggcggcagta
ctgaacaacgccagtaacattgaaaagatcaccttcttcatggaagaagcgaaacgcatg
ggtatcgacgtattgccacctgatgtgaacgagtcattcaaaggctttgcggtgaacaaa
caaggtcagatccgttttggtctggccggtctgaaaggtgtgggtgaagcagcggtagaa
aacatcctggaagaaagacaaaagggaagtaactacaagaacatctttgaaatgattaaa
cgtgtgaaccagcgtgcagtgaataagaaatcactggaagccctggccatgtcaggcgct
ttcgattgtttccctgagttacaccgtgcacaatatttccataaaccggataatgacaat
accaccggtcttgataagatcgtgaagttcggtcagcaggtatcggctggagctgccact
accatgagcagcctgttcggtgcagatgatatgccggaggtagaaccaccaaagatccca
ccttgcgatccatggccactgatcctgaagcttaacaacgagcgtgaggtgacgggtatt
tatatttctggtcacccgctggacgactaccgtttcgaatcacgttattataacatgaac
acggtacaggaattggttgaatatcaggcagatctccaggcgcctgggaatgctaaatcc
ggccgtgaacgtaacttcagactggctgtctatgtgaccggtgcacaggagcgtatttcg
cgaaacaaccgccagtttggcataatgacgatagaagactattccggtaagtttgagttc
gctttatggagtgaggacttcatccgctttgcgccatatctgaaaacagggctttgtctg
tttattaatggtggtttcaaggccaagcgttttaatgatgcagaatatgagttcaaggtg
aacggtatacagctgttacaggaagtgaagaagacgcatacgaagaaggtaacactggta
accatgcctaagttcatcacacgtgagctcgtagacttccttgttgacaacattaacaaa
tacccgggagcgagtgagctgtttttacaactcattgatcgtgatgatgccatgcaggtg
aaattgcatacatttaataaacatatcgagatgaacgatgaattggcacacttcctgtcg
aagcaaccagacatcgatacctatatagatacaatcaataagtag
DBGET
integrated database retrieval system
