Chrysemys picta (western painted turtle): 101938169
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Entry
101938169 CDS
T04662
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101938169 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101938169 (CPSF4)
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101938169 (CPSF4)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101938169 (CPSF4)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101938169 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_3
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
101938169
NCBI-ProteinID:
XP_008162949
UniProt:
A0A8C3IAM6
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Position
9:complement(8918916..8926740)
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AA seq
216 aa
AA seq
DB search
MCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFL
HIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPM
GTTEQPPLPQPTQPQQKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQSNNVG
NRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcctttccgacacatcagtggagaaaagacagttgtgtgcaaacactggctccga
gggctgtgcaagaagggagaccagtgtgagttccttcatgagtatgacatgaccaagatg
cctgagtgttatttctactccaaatttggagagtgcagtaacaaagaatgtccgttcttg
cacattgacccggagtctaagatcaaagattgcccctggtatgacagaggcttctgtaaa
cacggtcccctctgcagacacagacacactcgaagagtcatttgtgtgaattacctggtg
ggattctgtccggaggggcccgcttgtaaattcatgcatcctcgatttgaactgcctatg
ggaaccacagagcaaccaccactgcctcagccgacacaaccacagcaaaagcaaaataac
aatccgccattacaaaggtcatcatccttgatccagttaacgagtcagaactcttctccc
aaccagcagaggaccccacaagtcatcggagttatgcagtctcaaagcaacaatgtgggg
aacagaggtccccggccgctggagcaggtcacctgttacaagtgtggtgaaaaaggacat
tacgccaacagatgcaccaaaggacatctggcctttctaagcggacagtga
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integrated database retrieval system
