Culex pipiens pallens (Northern house mosquito): 120412587
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Entry
120412587 CDS
T07310
Name
(RefSeq) FACT complex subunit spt16 isoform X1
KO
K25639
FACT complex subunit SPT16
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpii03036
]
120412587
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
120412587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPT16
FACT-Spt16_Nlob
Peptidase_M24
Rttp106-like_middle
SPT16_C
Motif
Other DBs
NCBI-GeneID:
120412587
NCBI-ProteinID:
XP_039429034
LinkDB
All DBs
Position
3:48072139..48087742
Genome browser
AA seq
1119 aa
AA seq
DB search
MSNIVLDKDSFYRRIKRLYANWKEPEFSHDDSLSKVDCIVTAVGVDEETIYSKSTSLQTW
LLGYELTDTITVLCEKAIYFLTSKKKIDFLKQIEREAEENVPTVKLLVRDKNDKDKANFE
KLLEAIKGSKGGKTLGVFSKDNFPGEFCETWKKFLKEQSFESVDISVPMGYIMCAKEDSE
IITIKKACLVTVDVFNKYLKDHIMEIIDADKKVKHVKLSEGVEQALTDKKYVSGVDVNQL
DMCYPAIIQSGGNYSLKFSAFSDKNYLHFGSIICALGARYKSYCSNIVRTLLVNPTDTIQ
KHYTFLLNLEEELLKVMVPGKKLSDVYEFGLEYAKKEEPKLVDKLTKTFGFAVGLEFREN
SMIIGPKCAAVLKKGMAFSVNVGLSGLENKEASDKESKVYALFVGDTVLVNDESPASVLT
QSKKKIKNIGIFLKDDDDDEEEEEEVKTKKGPEILGRSGKRSTVLESKLRNEQNSEEKRK
LHQKELAIALNEKAKERLAKQGDGKEVEKVRKSTVSYKGVNQMPREAEVKDLKLFVDRKY
ETVIMPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGATMGKTETGMYPSPDATFV
KEVTYRSTNMKEPGEIAPPSSNLNTAFRLIKEVQKRFKTREAEEREKEDLVKQDTLVLSQ
NKGNPKLKDLYIRPNIVSKRMTGSLEAHVNGYRYTSVRGDKVDILYNNIKNSYFQPCDGE
MIILLHFHLRHAILFGKKKHLDVQFYTEVGEITTDLGKHQHMHDRDDLAAEQAERELRHK
LKTAFKSFCEKVEAMTKQQIEFDTPFRDLGFPGAPFRSTVLLQPTSGSLVNLTEWPPFVI
TLEDVELVHFERVQFHLRNFDMVFVFKNYNQKIGMVNAIPMNMLDHVKEWLNSCDIRYSE
GIQSLNWAKIMKTIVDDPEGFFDNGGWTFLDPESDGEGAANSETEDEEDDAYEPTDDDDP
EESDDSEDYSEASEDDSASDEDLGSEEESGKDWSDLEREAAEEDRNRDKDGYAEEPRTKK
RSHHRRDRGVESAKKRSSEGHGSSSKSSSRDKHHHKDKHGSSSGDRHKDKHRSSSGGDKH
RSSSGGDKHKSSSSSSSHKRSRDDSRDGSSHHKSKKSKK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacattgtgctggacaaggattcgttttatcgccggataaagcggctttacgcc
aactggaaggagccggagtttagccacgatgactcgctctccaaggtggactgcatcgtg
acggcggtcggagtggacgaggaaacgatctacagcaaatcgacctcgctccagacctgg
ctgctcgggtacgagctgaccgacaccatcacggtgctgtgcgagaaggccatctacttc
ctgacgagcaagaagaagatcgacttcctgaagcagatcgagcgcgaagcggaggagaac
gttccgacggtgaagctgctcgtgcgggataagaacgacaaggacaaggccaacttcgag
aagctgctggaggcgatcaagggctcgaaggggggcaaaacgctgggcgtgttcagcaag
gacaacttcccgggcgagttctgcgagacgtggaagaagttcctgaaggagcagtcgttc
gagtcggtggacattagcgtgccgatggggtacatcatgtgcgccaaggaggactcggag
atcatcacgatcaagaaggcgtgcctggtgacggtggacgtgttcaacaagtatctgaag
gaccacatcatggagatcatcgacgcggacaagaaggtgaagcacgtgaagctgtcggag
ggcgtggagcaggcgctcacggacaagaagtacgtgagcggggtggacgtgaatcagctg
gacatgtgctacccggcgatcatccagagcggggggaattacagcttaaagtttagcgcg
ttcagcgacaagaactatctgcactttggatcgatcatttgtgcgctgggcgcgcggtac
aagtcgtactgctcgaacattgtccggacgttgctggtcaacccgacggacacgattcag
aagcactacacgttcttgctgaatttggaggaggagctgctgaaggtgatggtcccgggg
aagaaactttcggacgtttacgagtttgggctggagtacgcgaagaaggaggaaccaaag
ctggtcgataagctgaccaagacgtttgggttcgcggtggggctggagtttcgcgagaac
tcgatgatcatcgggccaaagtgtgcggcagtgctgaagaagggcatggcgttcagcgtg
aacgtgggcttgtccgggctggagaacaaggaagcgtcggacaaggagtcgaaggtgtac
gcgctgtttgtgggcgacacggtgctggtgaacgacgaatcgccggccagcgtgctgacg
cagtccaagaagaagatcaagaacattggcatctttttgaaggacgacgatgacgacgag
gaggaagaggaggaggtcaaaacgaagaaggggccggagattctgggacggagcggaaag
cgctcgacggtgctggagagcaaacttcgtaacgagcagaactcggaggagaagcgaaag
ctgcaccagaaggagctggcgattgcgctgaacgagaaggccaaggagcggctggcgaag
cagggtgacggaaaggaggtggagaaggtgcgcaagtcgacggtgtcgtacaagggagtt
aatcagatgccgcgggaggcggaggtcaaggatctgaagctgtttgtggatcgcaagtac
gaaacggtaatcatgccgatttttggcgttccggtaccgttccacatctccaccatcaag
aacatctcgcagtcggtcgagggcgactacacgtatctgcgtatcaactttttccacccg
ggtgcgacgatgggcaagaccgaaaccggcatgtacccatcaccggacgcaacgtttgtt
aaagaagtgacctaccgctcgaccaacatgaaggagccgggcgagattgcgccgccgtcg
tcgaatctgaacaccgcgttccggttgatcaaggaggtgcagaagcggttcaagacgcgc
gaggccgaggagcgtgaaaaggaagatctggtcaagcaggacacgctggtgctgtcccag
aacaagggtaacccgaagctgaaggatctgtacatccggccgaacatcgtgagcaagcgt
atgacgggttcgctggaggcgcacgtcaacggctaccggtacacgtcggtgcgcggcgac
aaggtggacatcctgtacaacaacatcaagaactcgtacttccaaccgtgcgacggcgag
atgatcatcttgctgcacttccacctgcggcacgcgatcctgttcggcaagaagaagcac
ctggacgtgcagttctacacggaggtcggtgagatcacgacggatttgggcaagcaccag
cacatgcacgatcgggacgatctggcggcggagcaggccgagcgggagttgcgccacaag
ctgaagacggccttcaagagcttctgcgagaaggtcgaagccatgacgaagcagcagatc
gagttcgatacgccgttccgagatctgggcttcccgggggctccgttccgcagtacggtg
ctgttgcaacccacttctggttcgctggtcaaccttaccgagtggcctccgtttgtgatc
acgctggaggacgtcgagttggtacactttgagcgcgttcagttccacctgcggaacttc
gacatggtgtttgtgtttaagaactacaaccagaagattggcatggtgaacgcgatcccg
atgaacatgctggaccacgtcaaggagtggctcaactcgtgcgacatccgctactcggag
ggcatccagtcgctcaactgggccaaaatcatgaaaaccatcgtggacgacccggagggc
ttcttcgacaacggcggctggacgttcctggatccggagtcggacggcgagggcgccgcc
aacagcgaaaccgaagacgaggaggacgacgcgtacgaaccgacggacgacgacgacccg
gaagagtcggacgattcggaggactactcggaggcgtccgaagacgactcggccagcgat
gaagatctgggctcggaagaggaatcgggcaaggactggtccgatcttgagcgtgaagcc
gccgaagaggatcgcaaccgggataaggacggctacgccgaagaacccagaaccaagaag
cgttcccaccacagacgtgatcgcggagtagagtccgcaaaaaagcggtcgtccgaagga
cacggaagctcctcgaagagcagcagtcgcgacaagcaccaccacaaggacaaacacggc
agcagcagcggcgaccggcacaaggataagcaccgcagcagcagcggtggggacaaacat
cgaagcagcagcggcggggataagcacaagagcagcagcagcagcagtagccacaagcgg
tcccgcgacgacagcagagacggctcgtcccaccacaagagtaaaaagtccaagaagtga
DBGET
integrated database retrieval system
