Culex pipiens pallens (Northern house mosquito): 120414981
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Entry
120414981 CDS
T07310
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cpii
Culex pipiens pallens (Northern house mosquito)
Pathway
cpii04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120414981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpii04812
]
120414981
Cytoskeleton proteins [BR:
cpii04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120414981
Intermediate filaments
Intermediate filament-binding proteins
120414981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
DNA_pol3_delt_C
Motif
Other DBs
NCBI-GeneID:
120414981
NCBI-ProteinID:
XP_039432259
LinkDB
All DBs
Position
2:124788616..124859153
Genome browser
AA seq
2394 aa
AA seq
DB search
MTTDISVVRWDPSQGPGQEYIDEFEYDGGNSSSRLFERSRIKALAEERESVQKKTFTKWV
NSHLVRVNSRIGDLYVDMRDGKNLIKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLR
DQRVHLENIGSHDIVDGNASLNLGLIWTIILRFQIQDITIEETDNKETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFDKLTKNNPIQNLNNAFNVAEEK
LGLTKLLDAEDVFVEHPDEKSIITYVVTYYHYFSKLKQETVQGKRIGKVVGIAMDNDRMI
NEYESLTSELLKWIEVTIVQLGDRQFANSLVGVQQQLAQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKSEHERELALREELIRQEKLEQLA
ARFNRKATMRETWLSENQRLVSTDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVVAV
CNELEAEKYHDIERIAARKENVLRLWNYLLELLRARRMRLEFSIQLQQNFQEMIYILDSM
EEIKQRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKQVVQNSQKFLGDEEGGYKP
CDPAIIVDRVQRLEDAYAELCKLAVERRSRLEESRKLWQFYWDMADEENWIKEKEQIVST
DEIGHDLTTVNLLLSKHKALEKEINSHEQQLMAVSTVGDELVRQGHFGADRIDERLKEIL
VMWNNLLDLNVSRRKRLENAVDYFQLFADADDIDNWMLDALRLVSSEDVGRDEANVQSLL
KKHKDVADELKNYAETIEQLHTQAQNLTLTEPEQQKVQERLAAIDARYKELMELAKLRKQ
RLLDALSLYKLISESDGVEQWIGEKERMLQTMVPGKDIEDVEIMKHRYDGFDKEMNANAS
RVAVVNQLARQLLHVEHPNSEEIIEKQNHLNQAWSKLREQAEGKRDDLKSAHGVQTFYIE
CRETISWIEDKKRILTETDSLQMDLTGVMTLQRRLSGMERDLAAIQAKLTALESEADAIE
GDHPEEAALIRERVAQIQVIWEQLTQMLKERDSKLEEAGDLHRFLRDLDHFQAWLTKTQT
DVASEDTPTSLPEAEKLLNQHQSIREEIDNYTEDYTKMMEYGEGLTSEPTQTEDPQYMFL
RERLRALKDGWEELHQMWENRQVLLSQSLDQQLFNRDARQAEVLLSQQEHVLSKDDTPVN
LEQAENQLKRHEAFLTTMEANDEKINTIVQVSDQLAEKQHFDSDKIGKRAESIAHRRDDN
RNRAIELHEKLKNQVKLHEFLQDIEELTEWVQEKYITAQDDTYRSAKTVHSKWTRHQAFE
AEIAANKERLHEAQKAAQELMVEKPEFKEIIEPKLTDLAKNFDELETSTKEKGELLFDAK
REVIVQQSADDIDSWMDDLEKQIINTDTGNDLTSVNILMQKQQVIQTQMAVKARQVEELE
KQTEVLTKTAPQDVLEPIVEKKTAVNARFEKIKAPLLERQRQLEKKKEAFQFRRDVEEEK
LWIDEKMPLANSEENGNSLFNVHVLKKKHQSLNTEIDNHEPRIMTICNNGQKLIDEGHED
ASQFADLISQLTQKWQELKDSIDNRHKQLDQSEKVQQYFFDAAEAESWMSEQELYMMVED
RGKDEISAQNLMKKHETLEQSVEDYADTIRQLGETARQLTTEQHAYSDQVSVKQSQLDKL
YAGLKDLAGERRARLDEALQLFMLNREVDDLEQWIAERELVAGSHELGQDYDHITLLWER
FNEFAQDTAAVGSERVAKANGIADDLIHAGHSDSATIAEWKDGLNESWQDLLELIETRKA
MLAASRELHKFFHDCKDVLGRIIEKQHGVSDELGRDAGSVSTLQRKHQNFIQDLMTLHSQ
VQQIQEESSKLQAAYAGEKAREITNREHEVLAAWANLQGMCDARKNKLADTGDLFKFFNM
VRTLMLWMEDVVRQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREDNFSACLALGKELLA
RNHYASADIKERLLQLTNSRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPY
LMSTELGHTIDEVENLIKKHEAFEKSAAAQEERFSALERLTTFELKEMKRRQEAAEEAER
QRLQAEAEAKAAAEAEAEAARQAEAAARDQADAPGSPHSTKELESVHAETKPGREAKQIP
RPASSRTGTLPKYPSTGTDAPSTSTATTPRRHSGTPKERSASSASASASKVSRRSRSKSP
FRSFRWKRGTSKAEVSDDEGDRPSPGGTDEGAQEGILTRKHEWESTTKKASNRSWDKVYC
VARNGRLTFFKDQKSAKLVPEQTFRGEPPLELKGARIEIATDYTKKKHVFRIKLSNGAEF
LQQCHDDLEMNQWVTALKAQCELDASGEGRSLTLPASSQKDEQKRRSFFTLKKN
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtggtacggtgggatcctagtcagggtcccggccaggagtac
attgacgaattcgaatacgacggaggcaactccagttcacgccttttcgagcgatcacga
atcaaagctttagcggaggagcgtgaaagtgtccagaaaaagacgttcacaaaatgggtc
aactcgcacctggtgcgggtcaacagccgaataggcgacctgtacgtcgacatgcgggac
ggcaaaaacctcatcaaactgttggaagtattatccggcgagcgtttgccccgcccgacc
aagggcaagatgcgaattcactgcctcgagaacgtagataaggcgctgcagttcctacgc
gaccagcgggtccatctggagaacattggctcacacgacatcgtggacggcaacgcgagc
cttaacctcggtctcatctggaccatcatcctgcgattccagatccaagatatcaccatc
gaggagaccgacaacaaggagaccaagtccgccaaggatgcgctgctgctgtggtgtcag
atgaagaccgccggctaccacaacgtgaacgtgcgcaacttcacgacctcgtggcgggac
gggttggccttcaacgccatcatccacaagcatcgtccggatctgatccagttcgacaag
ctgaccaagaacaacccaatccagaacctgaacaacgcgttcaacgtggccgaggagaag
ctcggtctgacgaagctgctcgacgcggaggacgtgttcgtcgagcatccggacgaaaag
tccatcatcacctacgtcgtcacgtactatcactactttagcaagctgaagcaggagacg
gtgcagggcaagcgtatcggcaaggtggtcggcatcgcgatggacaacgaccgcatgatc
aacgagtacgaatcgctgacgagcgagctgctcaagtggatcgaagtgacgatcgtgcag
ctcggagaccgacagtttgccaactcgctggtcggcgttcagcagcagctggcgcagttc
tccaactaccgcaccgtcgagaaaccgcccaagtttgtcgagaagggaaacctcgaggtt
ctgctgttcacactccagtccaagatgcgggccaacaaccagaagccgtacacgccgaag
gagggcaagatgatttccgacatcaacaaggcgtgggaacgcctcgaaaaatccgaacac
gagcgtgaactcgccctccgcgaggaactcatccgccaggagaagctcgaacagcttgcc
gctcggttcaaccgcaaggctaccatgcgagagacatggctgtcggagaaccagcgtctg
gtcagcacggacaactttgggttcgatttggccgccgtggaagccgccgccaagaagcac
gaagccattgagaccgacatcttcgcgtacgaggaacgtgtccaggccgtggttgccgtt
tgcaacgagctcgaagctgaaaagtaccacgacattgagagaatcgccgctcgcaaggag
aacgtcctgcgcctgtggaactatctgctagaactgctacgagcccgacgaatgcgcttg
gagttctccatccagttgcagcaaaacttccaggagatgatctacattctggactcgatg
gaggagatcaagcagcgtctgctgaccgacgattacggcaagcatttgatgggtgtcgaa
gacctacttcagaagcactcgctggttgaggccgacatcaacgtgctgggcgaacgcgtc
aagcaggtcgtccagaactcgcagaaattcctcggagacgaagaaggaggctacaaaccg
tgcgatccggctatcatcgttgatcgcgtccagcgtctggaggatgcttacgccgaactg
tgcaaactggccgtcgagcgtcgttcccggctggaagagagccgcaagctgtggcagttc
tactgggacatggccgacgaggagaactggatcaaggagaaggaacagattgtttcaacc
gacgagattggtcacgacttgaccaccgtcaatctgctgctgtccaagcacaaggccctc
gagaaggagatcaactcgcacgagcagcaactgatggcggttagcaccgtcggtgacgag
ctggtccgccagggtcacttcggtgccgatcgcatcgacgagcgactcaaggaaatcctg
gtcatgtggaacaacctgcttgacctcaacgtttcccgccgtaagcgtttggagaacgcc
gtcgactacttccaactgtttgccgatgctgacgatatcgacaactggatgctggacgcg
ctgcgtctcgtgtcttccgaggacgttggccgtgacgaggctaacgtgcagagtctgctg
aagaagcacaaggacgttgccgatgagctgaagaattatgccgaaacaatcgaacagctg
cacacgcaagcccagaacctaaccctgaccgaaccggaacagcaaaaggtccaggaacgt
ctcgccgccatcgatgcccgctacaaggaactcatggaactggccaaactgcgcaagcag
cgtctgctcgatgcgctcagcttgtacaagctcatttccgagagcgacggcgtcgagcaa
tggatcggcgaaaaggaacgcatgctccaaaccatggttcctggcaaggacatcgaggat
gtggaaattatgaagcaccgatacgatggcttcgacaaggagatgaacgccaacgcgtcg
cgtgttgccgtcgtcaaccaacttgctcgccagctgctgcatgttgaacacccgaactcg
gaggaaatcatcgagaagcagaaccatctgaaccaggcctggtcgaagctgcgcgagcag
gctgagggcaaacgcgatgaccttaaatctgcccacggcgtgcagaccttctacattgag
tgccgcgagacaatctcctggatcgaggacaagaagcgaatcctcaccgaaaccgacagc
ctccagatggaccttacgggtgtcatgaccctgcagcgtcgtctgagcggaatggaacgc
gatctcgccgccatccaggccaagctgaccgctctggaaagcgaggccgatgccatcgag
ggtgatcatccggaagaagccgccctgatccgcgagcgtgttgcccaaatccaggtcatc
tgggaacagttgacgcagatgctgaaggaacgcgactcaaagctggaggaagccggcgat
ctgcaccgtttcctgcgcgatctggaccacttccaggcctggttgaccaagacacagacg
gatgtcgcttccgaggacacgccgacgtcgctgccggaggctgagaagctgctgaaccaa
caccagagcatccgcgaggaaattgacaactacaccgaggattacaccaagatgatggag
tacggcgagggactcacttcggagcccactcagaccgaagatccgcagtacatgttcctg
cgtgagcgtctccgtgctctgaaggacggctgggaggagctgcaccagatgtgggagaac
cgccaggtgctcctgtcgcaaagcctcgatcagcagctgttcaaccgcgatgcccgccag
gccgaggttctgcttagccagcaagaacacgttctcagcaaggacgatactccggttaac
ctggagcaggccgagaatcagctgaagcgtcacgaagcgttcctcaccacgatggaagcc
aacgacgaaaagatcaacacgatcgtccaggtgtcggatcagctggccgagaagcagcac
tttgactccgacaagattggaaagcgtgccgaaagtatcgctcatcgtcgtgacgacaac
cgcaaccgcgcgattgaactgcacgagaagctaaagaaccaggtcaagttgcacgagttc
ctgcaggacattgaagagctgaccgaatgggtccaggagaagtacattaccgcccaggat
gatacctaccgcagcgccaaaaccgtccacagcaaatggactcgccaccaggccttcgag
gccgaaattgccgccaacaaggagcgtctgcacgaagcccagaaggccgcccaagagctc
atggttgagaagccagagttcaaggaaatcatcgaacccaagttgacagatttggccaag
aactttgacgagctggagacgagcaccaaggagaagggagagctgctgttcgacgccaag
cgtgaagttatcgttcaacagagcgccgacgacattgactcctggatggacgaccttgag
aagcagatcatcaacacggacacgggtaatgatttgacctcggtgaacatcttgatgcag
aagcaacaggtcatccagacccagatggccgtcaaggcacgccaagtggaggaactggag
aagcagaccgaagtgctgaccaagaccgccccgcaggacgtgctggaaccgatcgtggag
aagaagacagccgtgaacgctcggtttgaaaagatcaaggcaccgctgcttgaacgccag
cgtcagttggagaagaagaaggaagccttccagttccgtcgtgacgtcgaggaagaaaag
ttgtggatcgacgagaagatgccgctggcaaactcggaggagaacggcaactcgctgttc
aacgtgcacgtgttgaagaagaagcaccagtcgctgaacaccgagatcgataaccacgag
ccgaggattatgacgatttgcaacaacggacagaagctgatcgacgaaggacacgaggat
gcttcccagtttgctgacttgatcagtcagttgacgcaaaagtggcaggagctgaaggac
tctatcgacaaccgtcacaagcagctggatcagtcggagaaggtgcagcagtacttcttc
gatgcggccgaagcggaatcgtggatgagcgaacaagagttgtacatgatggtggaggat
cgtggaaaggacgaaatttccgcccagaacttgatgaagaagcacgaaacgttggagcag
tctgttgaggactacgccgatactatccggcagttgggagaaactgcccgtcagttgact
acggaacagcatgcttacagcgatcaggtctcggtgaaacagtctcagctggacaaattg
tacgctggattgaaggacctcgcgggagaacgtcgtgcccgtctggatgaagctctgcag
ctgtttatgctgaaccgtgaagttgacgacctggagcaatggattgccgagcgtgagttg
gtcgctggatcgcacgagctgggccaggactacgaccacattacgctgctctgggaacgg
ttcaacgagtttgcccaggacacggctgccgtcggaagcgagcgtgtggccaaggccaac
ggcattgctgacgatctgattcacgccggacactcggacagtgcaacgatagcggaatgg
aaggacggattgaacgagtcgtggcaagacctgctggagctgattgaaaccaggaaggcg
atgctggctgcctcgcgcgaactgcacaaattcttccacgactgcaaggacgttctggga
cgcatcatcgagaagcagcatggagtctcggatgagctgggtcgcgatgccggatcggtg
tcgacacttcagcgtaaacaccagaactttatccaggaccttatgacgctccattcgcaa
gtgcaacagattcaggaagaatcatcgaagcttcaggccgcttacgccggcgagaaggct
cgggaaatcacgaaccgcgaacacgaagtgctcgccgcgtgggccaacctgcagggcatg
tgtgacgcacggaaaaacaaactcgccgacaccggagacctgttcaagttcttcaacatg
gttcgcacgctgatgctgtggatggaggacgtcgtccggcagatgaacacctcggagaag
ccacgcgacgtttccggcgtcgagctgctgatgaacaaccaccagagcttgaaggccgaa
atcgacacccgcgaggacaacttctccgcgtgtctcgccctcggtaaggaactgctcgcc
cggaatcactacgcttcggcagacattaaggaacgcctgctccagctgaccaacagcaga
aacgcgctgctgcaccggtgggaggaacgctgggagaatctgcaactgattctggaagtg
tatcagtttgcccgtgacgccgccgtcgccgaggcttggttgatcgcgcaggagccgtac
ctgatgtctacggagctcggccacacgatcgacgaggtcgagaacctgatcaagaagcac
gaggcgttcgagaagtccgccgcagcacaagaggaacgtttcagcgctttggagcgattg
acaacgtttgagctcaaagaaatgaaacgtcgccaggaggcagcggaagaggctgaacgt
cagcgtttgcaggcggaagcggaggcaaaggccgcggcggaagccgaagcagaggcggca
cggcaagcggaagcggccgcgcgagaccaggccgatgcgcccggatcgccacattccacg
aaggagctggaatcagtgcatgccgaaactaaaccgggtcgggaagcaaagcagattccg
agacctgcgagctcgcgaactggcacgctgcccaaatacccttccactggcaccgacgca
cccagcaccagcaccgccaccaccccgcggaggcactcgggcacgccgaaagagcgctcc
gccagcagcgccagtgccagcgcgtccaaagtcagccgaagatctcgctccaagagcccg
ttccggagtttccgctggaagcggggcacctccaaggccgaagtatccgacgacgaagga
gatcgtcccagccccggaggaaccgatgagggcgcccaggaaggtatcctcacccggaag
cacgagtgggagtctacgacgaagaaggcatcgaaccggtcatgggataaggtttactgc
gtggcccgtaacggtcgcctgacgttcttcaaggaccagaagtcggccaaactcgtcccg
gagcagacgttccgcggggaaccgccgctagagctgaagggagcgcgcatcgaaattgcc
actgactacaccaagaagaagcatgtgttcagaataaagctgtcgaacggcgccgaattc
ctgcagcagtgtcacgacgacctcgagatgaaccaatgggtaactgctttgaaagcccag
tgcgagcttgacgctagcggtgaaggccgttcgttaacgttgccagcctcatcacagaaa
gatgaacaaaagagacggtcattctttacactgaagaaaaattaa
DBGET
integrated database retrieval system
