Chiloscyllium plagiosum (whitespotted bambooshark): 122541943
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Entry
122541943 CDS
T08871
Symbol
usp54a
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 54a isoform X1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122541943
NCBI-ProteinID:
XP_043535160
LinkDB
All DBs
Position
38:complement(27540467..27675209)
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AA seq
1806 aa
AA seq
DB search
MSWRKGYFTPNNNLQDMFLPRSTTSIAASKGLMNAPGQNSCFLNSALQVLWHLDIFRRSF
RQITTHKCMGDSCIFCALKGIFTQFQYSKEKVLPSDALRSALAKTFQDEQRFQMGIMDDA
AECFENILMRIHFHIADETKEDICTAKHCIPHQKFAMTLFEQCVCTRCGATSDPLPFIQM
VNYISTTALCNQAIRMMERREKPTPDMFGELLQNASTMGDLRNCPSNCGEKIRIRKVLMN
SPEIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFYRVTDDKAKHTELYLVGMVCYYGK
HYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVLTRCIKSHYQPLLLLYADPRGTPVSVQD
LALADSHQYRTCYDSEDSGREPSISSDSRTDSSNESYHYKHSHHESAISHFSSESQGTVI
YNMEIDTASQSSRDTGISVDRRRSSSRPRHPDNREKTEKLDEVPSCGYHSEGETLKEKQA
PRTGPKPPTSRLKDFRETMSNIIHNRPSHNQDPSNSKSFPAKTTEPVDNDSFRMSGGQSR
DWETESTSSESKSSSSSRSKTYLWKPKREVLNIDSIFTKEKRRGPCYMQLNTTPEDDIKD
CNHNKTESSIGVGSAALTLDNTQNGGKGVNLNNDRYEKAGCPGKSMQQAGLHSSGENECF
IQRMESGYESSERNSNSPISLDASVTDGIPGGVQNSSANPFREANAKKPISSGPSWKTVP
KSKSSNALQQESSAASKSWVNMQQSFNENYSHPVRSELDELEEEIKRKTKEEELRRKKLR
EKEATMVFNPRPSKFMDLDELQNQGKTDKFERSLQEVDSLLEQSFRLEQKDDLAAALNLC
NEAMSKLRLAMHEGSAITHTKALADKKLHVCMKKVRSLQERMQQSIHSPPPGIPITECKS
MQASQVQVLLTSERAMEPTGESDHRPKASLVLSASHHQLNQHASRLRDSQSNSHGKVSTS
LASELKPNLSARCTTELPSPSNCNWVPAFLPREKKEESVSMSKHQLKNLDEPVEGKEKSD
CSVFNHKLTINKHGSLPLLTAEYRGMHHTFPSPSLHMSTQKDEIGVCSNSSPYSSQYCNS
SQFNATDTEISPCTTLSSTSLNWSPAESPPYQSHRSDLGLNLNSTEFDKACSSKTKTTVD
RVNVKSMTQQLQRINVKLGQRSDEGNYKSTCSDFSPKKFDQEVSQLPLTLNQKVGTLQGN
DQLGSTKWSSDSLYSPQISHRPLDCKAEVSVTPSMPTYQANTDAAAREVYSHLRRSGFSP
DVQTDETCGQKYQSAVQAVFRETSSKDKSVPVRQQNKLSSSTASVPVGKRIVGDMEHYML
QSDYKNSEQHHLHDNLPSQKSNTQAHGKPEVQPFKDTNQNLELEFSELESLYQASLQASE
NTRYSPGRQLAESTARQSSTKPVSAHTLTRKHFSLPGRGQSKTPTAEIERNAYSAVSCGA
PVPIRTKMHFGEFAARDIEENDNYSAENFRRIARSLSGTILANRDPVVPSQNVETTTLRK
CMELRKRSVSSSSLTTSQASSHDPHVLTSFLQHHSNLSKHLSSDPLWPSKASEANRASDE
NIEKFLAVFDRGEALNHENYQSVAVNYGTLPRFQKNWTKGQRPIRKGQMYVENKNDIQQR
LANNNQAVLPDKRKVEQLCRHPSSITTSRHLHQTRTEVPENHGCSNHFPVHYRPAHGTVQ
NTLPKNSNMTKTLDIQKSFYNKSSHSSTPGPVRLDVPPDEDWRKTSYTHPQPAERMHLAL
HTTARISSTDAYSRRPPAGRSVTQQATPHVGTRGRQCALCQQVVISTTMVYCRNCSAYMG
RFKPRH
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaggaagggctatttcacaccaaacaataaccttcaggatatgttcttgcca
cggagcacaacctctattgcagcaagtaagggactgatgaatgcgcctgggcaaaatagc
tgctttctcaacagtgcattgcaggtcctttggcaccttgatatttttcgaaggagtttc
agacagataaccactcacaaatgtatgggagattcctgcatcttttgtgctctcaaggga
atcttcactcagttccaatacagcaaagaaaaggtgttgccatctgatgctttgcgtagt
gctcttgccaaaacctttcaagatgaacagcgcttccagatggggatcatggatgatgca
gcagaatgttttgaaaatatccttatgcgaatacacttccacattgctgatgaaacaaaa
gaggacatttgcacagcaaaacattgcattcctcatcagaaatttgcaatgactttattt
gaacagtgtgtttgtactagatgcggcgcaacatctgatccactgccttttatccagatg
gtaaactatatttctacaactgcattgtgtaatcaagcaatacgtatgatggaaagacgt
gagaaaccaacgcctgacatgtttggggagcttctgcagaatgcaagcacaatgggtgat
cttaggaactgtccaagcaactgtggtgagaagatcagaatccgcaaagtgttgatgaac
tcgccggagataattactattggtctggtctgggactctgatcattctgatcttgctgaa
gatgttatccatagcctaggaacgtgcctcaagttgggagatcttttctatcgggtgaca
gatgataaagctaaacacacagagctctatttggtagggatggtgtgttactatggtaaa
cactattctaccttctttttccaaacaaaaattcgcaagtggatgtattttgatgatgcc
catgtgaaagagattggacccaagtggaaggacgtactgaccagatgcattaagagccac
tatcaaccgttactacttttgtatgcagatccgagaggcactcctgtgtctgtacaggat
ctggccctagcagattctcaccagtacaggacctgttatgacagtgaagattcaggaaga
gaaccatctatatcgagtgacagcagaacagattcttctaatgagagctaccattacaaa
cacagtcatcatgaatctgcgatcagccatttctcctctgagtcgcagggtacagtgatt
tataacatggagattgatacagcctctcaaagcagcagggacacagggatttctgtggat
agaagacggagttccagccgaccaaggcaccctgataatcgagagaagacagagaaatta
gatgaagttccatcctgtggttatcatagtgaaggtgaaacgctgaaagagaagcaagcc
ccaagaactggaccaaaaccacctactagtagattgaaggacttcagagaaactatgagc
aatataattcataatcgaccttctcataaccaagacccaagtaacagcaaatcatttcca
gcaaaaacaacagagcctgtagataatgacagttttcgaatgtcaggtggacagtcacga
gactgggaaacagaaagcaccagcagtgaatccaaatcaagctcatcgagcaggtcaaaa
acgtacttgtggaaacccaaacgagaagttcttaatattgatagcatttttacaaaagag
aaaaggaggggtccatgttatatgcagttgaatacaacacccgaggatgacataaaagat
tgtaaccacaataagactgaaagttcaatcggggttggaagtgctgctttgacactggac
aacacacagaatggaggaaaaggtgtaaacttaaataatgaccgatatgaaaaggctggg
tgtcctggtaaaagtatgcaacaagcaggactccatagttcaggagaaaatgaatgtttc
attcagagaatggagtctggttatgagagcagtgagcgcaatagcaacagtccaataagt
ttggatgcttcagttactgatgggattcctggtggagtacaaaactctagtgccaatcct
ttcagggaagcaaatgccaagaagcctatcagttctggtccttcatggaaaactgttccc
aagtcaaagagtagcaatgccttacagcaggagtcatcagcagcctcaaagagctgggtg
aacatgcagcaaagtttcaatgaaaactatagtcaccctgtgcgaagtgagttggatgag
ttggaagaggagattaaaaggaaaactaaagaggaggaactaagaagaaagaaactgagg
gaaaaggaagcaactatggtcttcaatccccggccaagcaaattcatggacttagatgag
ctgcaaaatcaagggaagactgacaagtttgagaggtcattgcaggaggtagactctcta
ttagaacagtctttccgtcttgaacaaaaggatgacttggctgcagcgctcaatctctgc
aatgaagctatgtctaaactaagacttgctatgcatgaaggcagtgccatcacacacacc
aaagcccttgctgataagaagctccatgtttgcatgaagaaggttcgaagtctgcaggag
cgcatgcaacaatccatccactcccctccaccggggatccccatcactgaatgcaaaagt
atgcaggctagccaggtccaagtactgctaacatcagagagagcaatggaacctaccggt
gaatccgatcacaggcccaaagcttccctcgtcctgtcagcctcccatcatcaacttaat
caacatgcttctaggttacgtgactctcaatcaaattcgcatggcaaagtttccacttca
ttggcttctgaactgaaaccaaacctatctgccagatgtaccaccgaacttccatctcca
agcaattgcaattgggtgccagcttttctccccagggagaagaaggaagagagtgtctcg
atgtccaagcatcagctgaagaatcttgatgaaccagtagaaggaaaggagaaatcagac
tgttcagtattcaaccataaattgacaataaacaaacatggttctttgccattgcttaca
gctgaatacagaggcatgcatcacacatttccatcaccatctctccacatgtcaactcaa
aaagatgaaataggtgtctgttcaaacagcagtccttattcttctcaatattgtaattca
agtcaatttaacgcaactgataccgaaatttctccatgtacaactttgtcgtccacaagc
ttgaactggtcccctgcagaatctcctccttatcagtcacatagaagtgatttaggtttg
aacttgaattcaacggagtttgacaaggcctgttcatccaagaccaaaacaacagttgac
cgggttaatgtaaagtcaatgacacaacagttacaaaggataaatgttaagttaggtcag
agaagtgatgaaggtaattacaaaagtacatgttcggatttttcaccaaagaaatttgat
caagaagtatcccagctacctctgactttgaatcaaaaggtgggaactcttcaaggcaat
gatcagttgggtagtacaaagtggtcttctgacagcttgtattctccccagatttcacac
agaccattggactgtaaagctgaggtatctgtgactccatctatgcctacttaccaagca
aacaccgatgctgctgcaagagaagtatacagtcacttgagaaggtcaggtttttcacct
gatgttcagacagatgagacatgtggacagaaataccaaagtgctgtccaagcagttttc
agggaaaccagttccaaggacaagtctgtaccagtgaggcagcaaaataagctttcttcc
agtacagcttctgtgcctgtgggtaaaaggattgttggtgatatggaacattatatgtta
cagtcagattacaaaaacagtgaacagcatcacttgcatgataatctgcccagccaaaaa
agtaacacgcaagctcatggaaaaccagaagtgcaaccatttaaggatacaaatcagaat
ttggaactggaattttcagaactggaatcgctctatcaagcaagtctgcaggcttccgag
aataccagatattcaccagggagacagttggctgagagcactgccagacaaagcagtact
aaaccagtttctgcacatacacttacaagaaaacacttctctctgcctggcagaggtcag
tcaaaaactccaaccgcagagattgagcgtaatgcttattcagcagtgtcttgtggagct
cctgtaccaatccgtacaaagatgcattttggtgaatttgctgcaagagatattgaggaa
aacgataattacagtgcagagaatttccgtcggattgctcgcagcctgagtggaactatt
cttgctaacagagatcctgtggttccttctcagaatgttgaaacaacaaccctgagaaaa
tgcatggagcttcgaaaaagatcggtcagttcgtcttccttgaccacatcccaagcttcc
tcccatgatcctcatgtgttaacctctttccttcaacaccattccaacctatcaaagcac
ctttcgtctgatccattgtggccaagcaaggctagtgaggcaaacagagcatcagatgag
aacatcgaaaaatttctggctgtgtttgaccggggtgaagctctcaaccatgagaactac
cagagtgttgcagtgaattatggtacactgccacgctttcagaagaattggaccaaagga
cagagacccatcagaaaaggtcaaatgtatgttgagaataagaatgacattcagcagaga
ctggctaacaacaaccaagctgtcctgccagacaagagaaaagtggagcaactttgcaga
catccatccagtataacaacaagcagacatctgcaccagactcggactgaggtgcctgag
aatcatggttgttctaatcattttcctgtgcattacagacctgcacatggtactgtccaa
aatactcttccaaaaaacagtaacatgacaaagaccttagatattcaaaaatccttttat
aacaagtcttcacactccagtactccaggtccagttcgccttgatgttcccccggatgaa
gactggaggaaaacaagctatacccatcctcagcccgctgagagaatgcatttggctcta
catactactgcaaggatcagtagtactgatgcatattcaaggcggccacctgctggtcga
tcagtgactcaacaggccactccacatgtgggcaccagagggcgtcagtgcgctttatgc
cagcaggtagtcatcagcacaaccatggtttattgccggaactgtagtgcttacatgggg
cggtttaaacctcgacattga
DBGET
integrated database retrieval system
