Chiloscyllium plagiosum (whitespotted bambooshark): 122542659
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Entry
122542659 CDS
T08871
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122542659 (lingo1a)
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122542659 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
V-set
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
122542659
NCBI-ProteinID:
XP_043536585
LinkDB
All DBs
Position
40:complement(18223570..18225544)
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AA seq
613 aa
AA seq
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MLVGEVSMSSSGVVCWQSVLLLILGAALSGHTSGCPARCDCSAQERSVVCHRKRFITVPE
GIPTETRLLDLSKNRIKTINQDEFVAYPLLEELELNENIISTVEPGAFSNLPNLRSLGLR
SNRLKLIPLGVFTGLNNLTRLDISENKIVILLDYMFQDLSNLRSLEVGDNDLVYISHRAF
SGLHSLEQLSLEKCNLTTIPTEALSHLHSLVVLRLRFLNINVIPNYSFKRLYRLKVLEIS
DWVYLDTMAPNCLYGLNLTSLTVTSCNLTAVPYVAIRHLVYLRLLNLSFNPIGTVHGHML
QELLRLQELHLAGSRLHTVEPYAFRGLSQLRLLNVSGNELVTLEEAAFHSVGNLETLIVD
RNPLACDCRLLWMFRRRWRLNFNRQQPVCASPEMVHGKEFKDFPDVLLPSYFSCRRARIR
DKAPQTVHVDEGHTVHFSCSADGDPTPVILWVSPRKQHISRKTNGRLTVFPDGTLEVRYA
QLQDNGSYQCIAMNAGGNDSTTATLHVRGYSPDWGQQGNKTFAFITNQPNDSNANSSRTS
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIG
TTDAPRKFNMKMI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgctggttggggaggtgagtatgtccagcagtggtgtggtctgctggcagtccgtcctg
ctgctcatcctcggggctgcgttatcgggccatacttcaggatgtccggctcgctgtgac
tgctcagcgcaggagaggtcggtggtctgtcaccggaaacgcttcatcaccgttcccgag
ggaattcccaccgaaacccggctgctggacctcagcaagaaccgcatcaagaccatcaac
caggacgagtttgtggcgtacccgctgctggaggagctggagctgaacgagaacatcatc
tccacggtggaacctggcgctttcagtaacctccccaacctgaggtccctgggcttgagg
agtaaccgcctgaagctgatccctctcggggttttcactggcctcaataatctgacccgg
ctggacattagcgagaacaagattgtcatcctgttggactacatgttccaggacttgtcc
aacctcaggtccctggaggtgggtgacaatgacctggtctatatctcccaccgggcgttc
agtgggctgcacagcctggagcagctctctttggagaaatgtaacctgaccaccatcccg
accgaagccctgtcccacctgcacagcctggtggtgctcaggctgcgcttcctcaacatc
aacgtgatcccgaactactcctttaagcggctgtaccggctgaaggtgctggagatctcg
gactgggtgtacctggacaccatggcccccaactgcctgtacggcttgaacctgacctcg
ctgacggtgaccagctgcaatctgaccgcggtgccgtacgtggcgatccggcacctggtc
tacctgaggttgctgaacctgtcctttaacccgatcggcaccgtgcacggccacatgctg
caggagctgctgaggctgcaggagctgcacttggccggctcccgcctgcacaccgtcgaa
ccgtacgcgttccggggtctcagccagctgcggctcctcaatgtgtccgggaacgagctg
gtcaccctggaggaggcagccttccactcggtgggtaacctggagaccctgatcgtggac
aggaacccactggcgtgtgactgccgcttgctgtggatgttccggcgtcgctggcgcctg
aactttaaccggcagcagcctgtgtgtgccagcccggagatggtccacggcaaggagttc
aaggatttccccgacgtgctgctgcccagctacttcagctgcaggcgggcacgcatccgg
gacaaggcgccgcagaccgtgcatgtggatgagggccacacggtgcacttcagctgcagc
gcggacggggaccccaccccggtcatcctctgggtctctcccaggaagcagcacatctcc
aggaagaccaacggccgcctcaccgtcttcccggacggcaccctggaagtgcgctatgcc
cagctccaggataacggcagctaccagtgcatcgccatgaacgcggggggtaacgacagc
accacagctaccctccatgtccgaggctactccccagactggggacagcagggcaacaaa
accttcgcgttcatcaccaaccaacccaacgacagcaacgccaacagcagccgcacctct
gtgcctttcccgtttgatatcaaaaccctcatcatcgccaccaccatggggttcatctcc
ttcctgggggttgtactcttctgtctcgtccttctgtttctctggagccggggcaaaggc
aacaccaaacacaacattgagatcgaatacgtgcctcggaaatcggacgcggggatcgga
accacggacgcccctcgcaaattcaacatgaaaatgatctaa
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