Chiloscyllium plagiosum (whitespotted bambooshark): 122549718
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Entry
122549718 CDS
T08871
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122549718 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cpla04031
]
122549718 (trim23)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122549718 (trim23)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122549718 (trim23)
GTP-binding proteins [BR:
cpla04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
122549718 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
G-alpha
SRPRB
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
MMR_HSR1
zf-C3HC4
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
122549718
NCBI-ProteinID:
XP_043545550
LinkDB
All DBs
Position
1:complement(76848008..76887565)
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AA seq
590 aa
AA seq
DB search
MAAAPVKLLLTPLGLGSASGSGSGSGTDSGSRSLRTANGCSVKVLECGVCEDVFSLQGDK
VPRLLLCGHTVCHDCLTRLPLQGRAIRCPFDRQVTELGDSGVWGLKKNFALLELLERLQN
GTANHHGASEEVLEISGERIIRCDEDESHIASMYCTVCATHLCADCSQLTHSTRTLAKHR
RVPLADKPHEKTMCSQHQVHVIEFVCLEEGCQSSPLMCCVCKEYAKHQGHKNILLETEAN
QIRASILDMAHCIRTFTEEISDYSRKLGGIIQKIEGGEQIIESRIGMAHPDHVQGSAENA
RSCVRAYFAELHETLFRQEEMALSVVDAHVREKLIWLKQQQEDMTILLSQVSTACLHCEK
TLQQDDCRVVMAKQEITHLLETLQKQQQQFTELADHIQLDASIPVTFTKDNRVHIGPKME
IRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPL
WKHYYLNTQAVVFVIDSSDRDRMMEAHSELAKLLAEKELRDALLLIFANKQDVTGALTVE
EITELLSLHKLCCGRSWHIQGCDARSGLGLHEGLDWLSRQLVAAGVLDVA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctccggtgaagctgctgctgacaccgttggggctggggtcggcgtcgggc
tctggatctggatctggcactgacagcggctctcgcagtctccgcactgccaacggctgc
tcggtcaaggttctagaatgtggagtttgtgaagatgtattctccctgcagggagacaaa
gtgcctcgcttgctcctttgtggtcacactgtctgtcatgattgtctcacccggcttcca
ctacagggaagagcgatacgttgtccatttgaccggcaggtgactgaattaggtgattca
ggtgtctggggcttaaagaaaaattttgctttgctggagctccttgaacgtttgcagaat
ggcactgccaatcatcatggagcatccgaagaggttcttgaaatatcaggagagcgcatt
atccgctgtgatgaagatgaaagccacattgcatctatgtattgtaccgtctgtgcaact
catctttgtgcagactgctcccagctaacacactccacacggaccttagccaaacatcgt
cgagtacctctagctgacaagccacacgagaaaaccatgtgctcacaacaccaagtgcat
gtgatcgagtttgtttgtttagaggaaggttgtcaatccagtcccctaatgtgctgcgta
tgcaaggaatatgcaaagcatcaaggtcacaagaacatactcttggaaacggaagcaaat
caaatccgtgcatctattttagatatggcacactgtatccgtacttttacggaggaaatc
tctgactactctagaaaacttggtggtattattcagaagattgaaggaggagagcaaata
attgaaagtagaattggaatggctcacccagatcatgttcaaggtagtgccgagaatgca
cgctcctgtgtccgtgcatattttgcagaattgcacgaaactctatttaggcaggaggaa
atggcgctgagtgtagttgatgctcatgtgcgggagaaattgatatggctgaaacaacag
caagaggacatgacaattctactgtctcaggtttcaacagcttgtctccactgtgaaaaa
acattacaacaggatgactgccgtgtagtgatggcaaaacaagaaatcactcatttgctg
gaaacattacagaagcagcaacaacagttcacggaacttgctgatcacattcaattggat
gctagtatccctgtgaccttcacaaaggataaccgtgttcatattgggcccaagatggaa
atacgtgtagtcactttgggactggatggagcaggcaaaacaactattcttttcaagttg
aagcaggatgagtttatgcaaccaattccaactataggttttaatgtggaaactgtagaa
tataaaaacttaaagtttactatttgggatgtaggaggcaagcataaactgaggccactt
tggaagcattattaccttaacacacaagcagttgtatttgtgattgacagcagtgacagg
gaccgaatgatggaagcacacagtgaattggccaagttattggctgaaaaagagttaagg
gatgctttactccttattttcgccaataaacaggatgtgactggagcacttactgtcgaa
gaaataaccgaattactcagtctgcacaagctgtgctgtggtcgtagctggcacatacaa
ggctgtgatgcccgaagtggattaggactacatgaagggttggattggctctcaagacag
ttggtggctgcgggtgtgttagatgtagcctaa
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