Chiloscyllium plagiosum (whitespotted bambooshark): 122550082
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Entry
122550082 CDS
T08871
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03271
Virion - Rotavirus
cpla04145
Phagosome
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04514
Cell adhesion molecules
cpla04530
Tight junction
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
122550082
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122550082
04514 Cell adhesion molecules
122550082
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122550082
09144 Cellular community - eukaryotes
04510 Focal adhesion
122550082
04530 Tight junction
122550082
09142 Cell motility
04820 Cytoskeleton in muscle cells
122550082
04810 Regulation of actin cytoskeleton
122550082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122550082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122550082
04515 Cell adhesion molecules [BR:
cpla04515
]
122550082
04090 CD molecules [BR:
cpla04090
]
122550082
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122550082
Exosome [BR:
cpla04147
]
Exosomal proteins
Proteins found in most exosomes
122550082
Cell adhesion molecules [BR:
cpla04515
]
Integrins
Integrin beta subunits
122550082
CD molecules [BR:
cpla04090
]
Proteins
122550082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
122550082
NCBI-ProteinID:
XP_043546544
LinkDB
All DBs
Position
5:complement(89492885..89573603)
Genome browser
AA seq
803 aa
AA seq
DB search
MRMTLKYIIYIGLICCCMWDGLAQSDLSECLKANAKSCGDCIQAGRNCGWCTKNKFLQQG
EPNSARCDDIESLKKRGCEIEDIENPKGSQRVDANKELTGRTSGEKVELKDITQIRPQKL
TLKLRSGEPQTFPLYFKRAEDYPIDLYYLMDLSFSMKDDLENVKKLGTELQTEMQKITSD
FRIGFGSFVDKTVMPYISTTPAKRKNPCSSGEVCTSPFSYKNVLSLTNDGSKFNELVSNQ
TISGNLDSPEGGFDAIMQVAVCGERIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDG
NCHLDTQGLYTMSDHFDYPSIAHLVQKLGDNNIQPIFAVTEEFKGVYKALHDLIPKSEVG
VLSSNSSNVIKLILDAYHALSSEVILENSKLPEGVSIHYTAFCKNNTVHTGEEGRKCLGI
QIGDEVSFNISITAKKCPNNGEKATIQIKPLGFNEKVEIDLEFVCECDCHKKGIPNSPDC
HQGNGTFECGACRCNKGRIGRFCECSTDQVNTEDMDASCRKDNASQICSDNGDCVCGECL
CKKRENPNEIISGKYCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYSGNACDCSLDNS
TCISENGQMCNGRGTCECGRCKCTDSKFQGAACEMCPTCPGVCTEHRDCVQCKAFNKGRK
KENCDECEFDVILVKEQGDLPPPSQDSPILHCKEKDEDDCWFYFSYSVNDQNVPEVYVTE
NPECPQAPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQE
NPIYKSPINKFKNPNYGRKVASL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgactttgaagtatatcatttatattggactgatttgctgctgcatgtgggat
ggacttgcccaatcagatcttagtgagtgtttgaaagccaatgccaaatcatgtggggac
tgtatacaagctggtagaaattgtggatggtgcaccaaaaataaattcttgcagcaggga
gaaccaaattctgcacggtgcgatgacatagaatcactaaaaaagagagggtgtgaaatt
gaagatattgaaaatccaaaaggttcacaacgtgtagatgctaataaagaacttactgga
cgtacaagtggcgaaaaggtagagctgaaagacattacacagatcagaccgcagaagcta
actctgaaattacgatcaggagagccacaaacctttccattgtactttaagagagcagaa
gactatcccattgatctctactatcttatggacctctccttttctatgaaggatgattta
gaaaacgtaaagaagttaggaacagaattgcagactgaaatgcaaaagataacgtctgat
tttcgaattggatttggttcatttgtggataagactgtaatgccttacatcagcacaacc
ccagccaaaaggaagaatccttgctcaagtggtgaagtatgtactagtccattcagctac
aaaaatgtcctgtcattgaccaatgatggatcaaagttcaacgaacttgtaagcaaccag
actatttctgggaacctggactctccagaaggaggttttgatgccataatgcaggtggct
gtctgtggagaaagaattggctggcgcaatgtcactcgtttgttggtgttctctacagac
gcaggatttcactttgctggagatggtaaactaggtggtattgttttaccaaatgatggg
aattgccatcttgatacacaaggtctctacaccatgagtgaccattttgattatccatct
attgctcatttggtgcaaaaacttggtgacaataatattcaacctatttttgcagtcaca
gaagaattcaagggtgtgtacaaggcgctccatgatctcattccaaaatcggaagtgggg
gttctatcatcaaactctagtaatgtaatcaagctgatccttgatgcttatcatgctttg
tcatctgaggtaatccttgagaacagcaaattgccagaaggagtgtcaatacattataca
gccttttgtaaaaataatactgttcatacaggggaagaaggcaggaagtgtttaggcatt
caaattggtgatgaggtgagcttcaacataagtatcacagcaaaaaaatgcccaaataat
ggtgaaaaggcaactattcaaatcaaacctctgggatttaatgagaaagtagaaattgat
ctggagtttgtttgtgaatgtgattgccataagaagggaattcctaatagcccagattgt
caccagggtaatggaacatttgaatgtggagcttgcagatgtaacaaaggacggattggt
cgattttgtgagtgcagcactgatcaagtgaatactgaggatatggatgcttcctgcaga
aaggataatgcatctcaaatctgtagtgacaatggagattgtgtctgtggggaatgcctc
tgcaaaaagagggaaaatcctaatgaaatcatctcaggcaaatattgtgaatgtgataac
tttaattgtgatcgatccaatggattgatttgtggaggaaatggtgtctgtaagtgccgg
gtctgtgaatgcaaccccaactattctggcaatgcttgtgattgctccctggataattca
acatgcatttcggagaatggacagatgtgtaatgggagaggcacatgtgagtgtggccgc
tgcaaatgcactgattctaaattccaaggagctgcatgtgaaatgtgtccaacctgccct
ggagtatgtacagaacacagggattgtgttcaatgtaaagcctttaataaaggacgcaag
aaagaaaattgtgacgaatgtgagtttgatgtaatactggtgaaagagcaaggtgatttg
ccgccaccaagccaagattcaccaatccttcattgtaaggagaaggatgaagatgattgt
tggttctacttttcctattctgttaatgatcagaatgttccagaagtttatgttactgaa
aacccagagtgtccacaagcacctgacatcattccaattgtagctggtgtggttgctggt
attgtcttgataggtcttgccctgttgctgatatggaaattactgatgattattcatgac
agaagggagtttgcaaaatttgaaaaagagaaaatgaatgccaaatgggatacacaagaa
aatcctatttacaagagtcctataaacaaattcaagaatccaaattatgggcgtaaagtt
gcttctctctaa
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