Chiloscyllium plagiosum (whitespotted bambooshark): 122550847
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Entry
122550847 CDS
T08871
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122550847
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
122550847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
122550847
NCBI-ProteinID:
XP_043548116
LinkDB
All DBs
Position
1:complement(95237644..95591004)
Genome browser
AA seq
1745 aa
AA seq
DB search
MASPGSRDTEWGESQQQDSGPGPAFTEAQHWIEQVTGRSFGDKDFRTGLENGILLCELLN
AIKPGAVKKINRLPTPIAGLDNITLFLRACEELGLKGSQLFDPGDLQDMTNRATIKVSDY
SRKMKNVLITIYWLGKTANSCTSYSGPTLNLKEFEGLLSQIQKEMDDTDSPKRSIRDSGY
IDSWDSERSDSLSPPRHTRDDSFDSLDSFGSRSQQTPSPEVLLRGSSDGRGSDSETDVTQ
KAPDMKRDDMSVRRTSYSEPKSSVPFNQYLPNKSNHTAYMPAPLRKKRAERGENYRKSWS
NTTSPVAAERPFSHSHPETIEEEQNEESYQDEEFSQLSSTFSEVQGIDHSKATVKCESSL
PGDADSLKNHSQVCVAEDSGHRVPREDTKWERKDEEEIKKLKRIQKAGITVMPASKRYCR
QKRQDESCGQTTPDIILRRENAFLTSYQDNESDSEEEEQKVPDIEKDDLALRKAQMHQCK
SKVVVNQFLPGPCTKKDRERWKSIKQSAYEAVRASQSKEQKMDSQSHIQVTESELIVPQK
ASMLLESQQENDAKVEEQQKGPDIERDDLARRKALGGFTGRQKPQTFSPSSITSADMEMW
QKLQLSTDTSEDTSKPNKKVSEVKPMSETEVEKAAQDNPSCRKARSRTSASGSCQRSVHF
GPVTEIDQQYWEKLNIAGTGPDSEAQKGADGCTIKTYTCHLLPSVASTVILNSQDSIIEG
ESQVISGNKISLDSQCELSCKYEDMFHTDTCTAEYFRRTPSPILVVQTVTLSESSNDSSE
EDDDGKTPDLEKDDMMTRRIKASSKQRSAAFNKFLPVPSSQRGQSKSGISKGPEKDVKTV
NKPKKESLRTYSPTDALSDDAGSISMIDMRPEDVTIQPHSKARHEELHNIHSRLREDQDK
WQDDLARWKNRRRSASQDLIKRKEERDIVEKIMSGERSSERRRSIKTYREIVEEKECREL
ALQEAYKNARTPEEAEAILKKYSQRFIISEPILESLVMPKFLERSQSVDSDTPSSPTKDP
NSLKYLRQQSLPIQKYTATVEAMIMPSSQSQTNVSATVTSPTRTIASKAVPMLTPKPYSQ
PKDSQTVLKSFKKDGKIRMNGETSPTFTRVEEKEPTSAIPTSSQMLANVASVDTPPLTSQ
IDDNCHVSGPEQEISSTINDPETEDTEQEERTEMPIIIGTSQQSSTEEGPDLKPCCNKTE
KGTVKDTTQEEDHPSNLETSTVHIALSNNVTKNTVDSKNLMTDEAFLNPEKEKPSDSVQI
QLQQETLKSEALQHGETGDVFESIQRISELEEETTGGSQPDNAISQQESPNTASVPVKVR
NSWRRSEFFSQPAEVKDSENVNIPVAPLNLPKRFDRWYWDPEEERKRQERWQKEQERLLQ
ERYRKEQEKLRQEWEKAQREVEEEERRYHEEERKIIQETVTPLTPQSPALSAHHPNEWIC
PSKREENSHSDHIESSSMDPENTNVKLQKDAVEAESWQAEDKGQMEAEEEHRLQKEQQHK
LMWKPADSQNFKKDETEQQENWDETGKSKVETWHWQESKQLESEQQKLNVQSEVHIFQMD
KETVSERQPQAIWQIPFADHQKLPAQAAGSPLFASKSWNTEEPPSFLEIPRKQQQGDVVK
TGSLDRSWALQSNIMDRKNWSGSHENLQSGQSPPLPHSSLQLQAPSRSVSGKKLCSTCGL
PLGKGAAMIIETLSLYFHIQCFTCGICKGQLGDATTGTDVRIRNGLLNCNDCYIRSRTAG
QPTTL
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggccagccccggctccagagataccgaatggggagagagccaacagcaagactccgga
cccgggccagctttcaccgaagctcaacactggatcgaacaagtaacaggcagaagtttt
ggtgataaggactttcgaacgggtttggaaaatggaatcttgctttgcgagttgttaaat
gctattaagcctggggccgtgaagaagatcaatcgtttgccgactcccattgcaggactg
gacaatattacattatttttgagagcgtgtgaagagcttggacttaagggatcgcagctt
tttgatccaggtgatcttcaagatatgaccaatagagccacaatcaaggtatcagattac
agcaggaaaatgaaaaatgttttgatcactatatattggttgggaaaaacagcaaacagc
tgcacatcctacagtgggccgaccctgaacctgaaagaatttgaaggattgttatctcag
atccaaaaggagatggatgatacagacagtccaaaaagaagcattcgtgacagtggctac
attgacagctgggactctgaacgcagcgactccctgtcacctcccagacataccagagat
gattcctttgatagtctggattcatttggatcacgatcacaacagacaccatccccagag
gtgctacttagaggaagtagtgatggtcgtggcagtgactctgaaacagatgtaacacag
aaggcacctgacatgaaacgagacgacatgtctgtaagacggacttcctatagtgaaccc
aagtcatccgtgccatttaaccaatatctacccaacaagagcaatcatacggcctatatg
ccagcacctcttcggaaaaaacgggcagagcgaggggaaaattatcggaagagctggagt
aacactacttcacctgtagcagcagagcgaccattcagtcatagtcacccagagactata
gaggaagagcaaaatgaggaatcctatcaagacgaagagtttagccagctgtcatctaca
ttttctgaggttcaaggaattgatcattccaaggcaacagtgaaatgtgaatcgtctctt
cctggggatgctgatagtcttaagaatcattcacaagtttgtgtggctgaagactcagga
cacagagtgcccagagaagacacaaagtgggagaggaaagatgaagaagaaatcaagaag
ttgaagagaattcagaaagctggtatcacagtcatgccagcatctaagcgatactgcaga
caaaagcggcaagatgaaagctgtgggcaaaccactccagatatcatcctccgcagggag
aatgcatttttgacaagctatcaggacaatgagtcagactctgaggaggaagaacaaaaa
gttccagatattgagaaagacgacctcgcattgagaaaagcacagatgcatcagtgcaag
tccaaagttgtggtcaatcaattcttacctggaccatgcacaaaaaaagatagggagcgc
tggaagagtattaaacaatctgcatatgaagctgtcagagcttcacaaagtaaagagcag
aaaatggacagccaaagtcatattcaggtgacagagagtgagttgattgtcccacaaaaa
gcaagtatgctgctggagtcacagcaggagaatgacgccaaggtggaagagcagcagaaa
ggcccagatatagagcgtgatgacctggctcggcgaaaggccctgggtggctttactggt
cggcaaaagcctcaaaccttcagtccttcctcgatcacatcagctgatatggaaatgtgg
cagaagctccagctttctactgacaccagtgaggacacttccaagccaaataaaaaagtt
tctgaagtgaagccaatgtctgaaactgaagtagaaaaagcagctcaagacaacccttcc
tgccgaaaggcaagaagcaggacaagtgcttcaggaagctgccagcgttctgtgcatttt
ggtcctgtgacggagatagatcagcaatactgggagaagttaaacattgctgggaccggt
ccagacagcgaagcacagaaaggggcagacggttgtactatcaaaacctacacctgccat
ctcttaccctcagttgcttcgacagttatcctcaattcacaggacagtataatagaaggt
gaatcacaagtcatttctggcaacaaaatcagtcttgactctcaatgtgagctcagctgt
aaatatgaagacatgttccacactgatacatgcacagctgagtattttcgacgaacccct
tctcctatcttggttgtccagactgtaactctcagcgaaagcagtaatgattccagcgag
gaagatgatgatgggaagaccccggatctagagaaagatgacatgatgaccaggcggata
aaagcctcctccaaacagagaagtgctgcctttaataaattcctcccagtccccagttca
cagcgaggacagtccaagagtggaattagtaaaggacctgagaaagatgtaaagacagtg
aacaaacccaagaaggaatctctgaggacatacagtcctacagatgccctgtctgatgat
gcaggaagcattagtatgatcgatatgaggcccgaagatgttacaatccagcctcatagt
aaagctcggcatgaggaactacacaacattcatagccggctacgtgaggaccaggacaaa
tggcaagacgatctggctcgctggaagaaccgcaggaggagtgcatcccaggatctaatc
aaaaggaaggaggaacgagatattgtggaaaaaataatgagcggggagcgcagttcagaa
aggcggaggagcattaaaacatacagagaaattgtggaggagaaggaatgcagagaactt
gctcttcaagaagcgtataaaaatgcaaggacacctgaagaggctgaagccattttgaaa
aaatattcacagagatttatcatcagtgaacctattcttgaaagcctggtgatgccaaaa
ttcctggaaagaagtcaatctgtggactctgatactccatcctcaccaacaaaagatcct
aattcactgaagtacttacgacagcaatcattgcctatccaaaaatatactgctactgtt
gaagcgatgatcatgcccagcagccagtcccagacaaatgtttctgcaacagtaacatcc
ccaaccagaactattgcctctaaggcagtgcctatgttgacccccaagccttattcacaa
ccaaaagattcacaaactgtgctgaaatcatttaagaaggatggaaaaattagaatgaat
ggggagaccagcccaacattcaccagagttgaagagaaggaacccacatctgcaatacct
acatcatcacagatgcttgcaaatgtggcaagtgtggacactcccccattaacatctcaa
attgatgataactgccatgtgtctggaccagaacaggagatttcttcaaccataaatgac
ccagagactgaagatacagagcaagaggaacggactgaaatgccaatcatcattggcacc
agtcaacagtcgagcacagaagaaggacctgatctgaaaccttgttgcaataagactgaa
aaagggacagtgaaagatacaacacaagaagaagatcatccttcgaacttggaaacatcg
acagtacacattgccctctcaaataatgtaacaaagaacacagttgattccaaaaatcta
atgactgacgaagcctttttaaatcctgagaaagagaagcccagtgacagtgtgcaaata
caacttcaacaagagacattaaaatcagaggcacttcaacacggtgaaacgggagatgta
tttgaatccattcagagaataagtgaactggaggaagagactacagggggcagtcagcct
gataatgctattagtcagcaagagtcacctaacactgccagtgttccggttaaagttcgg
aactcctggcgacgctcagaatttttctctcagccagcagaagtgaaagacagtgaaaat
gtaaatatcccagttgctcctttaaatctccctaagcgttttgaccgctggtattgggat
ccagaagaagaacgcaagcgtcaggaaagatggcagaaagagcaggaacgcttgctccag
gaaaggtacagaaaggagcaagaaaaacttcgccaggaatgggagaaagcacaaagagag
gttgaggaagaggaacgtagataccatgaagaggaacgtaaaattattcaggaaacagtg
accccgctgactccacaatcaccagcattgtctgcccatcatcccaatgagtggatctgt
ccatcaaaacgtgaggaaaactctcattctgaccacattgagagttcctccatggatccg
gagaacacgaatgtcaaattgcagaaagatgcagtggaagcagagagttggcaggcagaa
gataaaggacaaatggaagcagaagaggagcaccgattgcagaaggaacagcaacataaa
ttgatgtggaaaccagcagattcacagaactttaaaaaagatgagactgagcaacaggaa
aactgggatgaaactgggaagagcaaagtggagacttggcactggcaggagagcaaacaa
ctagaatctgaacagcaaaagttgaatgtccaatctgaagtacacattttccaaatggac
aaggagactgttagtgaaagacagccccaagcaatctggcaaataccttttgcagatcac
cagaaattaccagctcaagctgcaggatctccactatttgctagcaaatcatggaataca
gaggaacctccttcgttccttgaaattccaaggaaacaacaacaaggagatgtagtgaag
actgggtctctggacagaagctgggctcttcagtctaatataatggacagaaaaaactgg
tctggatctcatgaaaacttacaatcgggtcaatctccgccactcccacactcatctctt
cagctacaggcacccagtaggtcagtcagtgggaagaagttgtgctcaacttgtgggctt
cctcttggaaaaggtgcagccatgatcatcgaaacactcagtctatatttccatattcag
tgtttcacgtgtggtatctgtaaaggtcaacttggagatgcaaccactgggacagatgtc
cggattcgtaatgggcttcttaattgtaatgattgttacatcaggtccagaactgctgga
caacccactactttatga
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integrated database retrieval system
