Chiloscyllium plagiosum (whitespotted bambooshark): 122551435
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Entry
122551435 CDS
T08871
Name
(RefSeq) fibronectin-like isoform X1
KO
K05717
fibronectin 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122551435
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122551435
09142 Cell motility
04820 Cytoskeleton in muscle cells
122551435
04810 Regulation of actin cytoskeleton
122551435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122551435
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122551435
00536 Glycosaminoglycan binding proteins [BR:
cpla00536
]
122551435
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122551435
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
122551435
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
122551435
Glycosaminoglycan binding proteins [BR:
cpla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122551435
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
122551435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
fn2
NDNF
Motif
Other DBs
NCBI-GeneID:
122551435
NCBI-ProteinID:
XP_043549270
LinkDB
All DBs
Position
7:28188065..28283764
Genome browser
AA seq
2419 aa
AA seq
DB search
MHHSTVGVLLLAVCLNAASGHVGKSRRQSPYDGGTQNQNYCVDNGKIYHVNQQWERTYMG
RVMICTCYGAGQGWNCESKPDVEEMCYDQYTGTRQRVGDTWERPKDGMIWDCTCIGAGRG
RISCTIANRCHEGGQSYKIGDTWRRPHETGGHMLECVCLGNGKGEWTCKPIAERCYDNVA
GSTHVVGETWERPYQGWMMMECTCLGEGSGRITCSSRNRCNDQDIQKSYRIGDTWTKTDS
RGHLLHCSCKGKGHGVWECERHTSLVSGPESSSHLQHNVQPAIYQPQPQCVSDGGISYSD
GMQWLKKQGSARMLCTCLGNGVSCRDLPSQTYGGNSNGKPCMFPFTFMGKTYTSCTNEGR
SDDKFWCSTTKDFDTDRSYSFCNQHATTYIQSRGGNSNGALCHFPYLYNMRNYTECTSDG
RRDSMKWCGTTANYDADRKFGFCPMAENEEICTNSDGVMYHVGDQWDKMHEQGYMMRCTC
HGNGRGEWACIAHAQLRDQCVVDDITYEVGQTFYKQHEEGHSMNCTCYGQGRGRWRCDAL
DQCQDTDTQRFYQIGENFRKYLNGIQYQCHCYGRGIGEWSCQPLTALSGSEPIKVMITEV
GNQTDSHPILWNKPESFHVTQYTLKWKPKNSRERWREVTIPGNMYSYTIRDLKPGLTYEG
ELIGRVWNGRSMFTNFEFTTSYMTRSPTEGETPLLPEEDIIRESSTTESITEITSSSFVV
SWVSASDTVSGFRIKYELSEDQAQPQYLDVPSTATSVSIPNLLPGRKYIVNVFEVSEDGE
KLILTRTPTTAPDSPTEYTVDHVDETSITIEWSRPQAPITGYRVVYTPSVEGASTEIILP
STATHLTLTDLLPGIQYNISIYSVEESQESVPLVIQQTTDGVPQAVVLEPPTNLQFNDVT
ENKITVMWTPPRAVIIGYRVTMLPLDRHDRQSTELRPSTNSAQFTSLLPGTTYRFSVYAL
NNEVESQPLVGQQTTKLDAPTNLKFRDITKNSVLVTWTPPRARITAYVLTWALTTDENVK
TIQLEPNFTRYRLHRLLPGSEYVVSLTAKQGNLTSQRVHNILTTRETVGPVPNFNTEVTD
TAIIITWTPMPRISFRVGVRPSQGGETPQEVTSNSGSIIISSLTPGTEYTISITVIADDQ
VQDNPITKTVVTELAPPTDLQVYPDPTTGDLIVTWREGPSTDITGYHVTCTPKPGQQGNL
LEEFVEAGQTSWIPENLTPGIEYNVSVYTVKDNKKSQPVSTVITQEIPQLTDLTFVDVSD
TSIGLQWTPLNYSAITGYRITVIAAGESVPILEDFVSSSTGYYTVQGLEPGIDYDISVIT
LIEGGTSVTTTRKQQTAVPPPTNLRFTHVGADTMRISWSPPPSIDLSNFLVRYRPVGDEE
GSTDLTITPSNSMVVLTGLQPGTEYRVQVYSVIDERESAPLSGTQRTGIDSPTGIDFSNV
ATTSFTVHWLPPKAHVTGYRVRHYLESGARPRDERVPASRTSLQLTNLVPGSEYVVSIYA
FNGRQESLPLVGHQSTISDSPTDLEFTRSTPTSLTISWKPPPVFVKVYRIAFGESGGHGQ
VKEVIIPGSESTATIDGLRPGTEYTVTVYAVTGRGDSPATSKPVVGSEKTEIDTPTSLKV
KEVHDNSLTISWKPPVAPVTGYKVTSVPKDGVGPVITRSVPAGQTQLTIEGLMPTVEYMV
SVYALGKHGESAPLTETAATTIDRPKELTFTDVDVDSIGLAWESPEGQVTAYRVIYSSPE
DGVRELLPSPNPEDDTAELVGLRPGTEYTVQVYALYDNQESIPLTGTQTTAIPPPTNLEF
VQVTPTSMTIAWHAPDADVTRYRVVVKPREKAGPSKELTLGPDNTSATVSGLMVATKYNI
FVYAIKDALTSQPLQGIKATLDDVGSPRKIQVSGVTETSITLQWRIKARTVSGFQIDAVP
TGQQSPVQRTVGPNQRSYTITGLQPGTEYSINIYTLSGDSRSPPSTVIARTAIDSPSNLR
FISTTADSIVFTWQQPRAHITGYIVTYHAKGRPSVELRPRPPANSNEAMITGLRPGTEYT
INIRAIQNSLQSEPLSGKKVTGPDDRGQRPLVDRDGKDGQPDDQSSQPRPSRPVRPEDDR
KRTTEGPHSQRPIFPIHSHGVEEMEVDLPNGHGGQPDTQAPGQETRQPKTIVSWQPSTIA
LEYLVTCYPVGQKENAFQLRVPGTSTYAVLPNLVLGTRYNILVEALDGQGKHKVLEDIIT
VGHTSPDHGTQLIPDESCFDTATNSHYAIGQEWERMSETGFKLWCKCLGYGSGHIRCDST
KWCHDNGMNYRVGEKWNRRSDNGQMLSCTCLGNGKGEFKCEPHEASCYDEGNMYNVGEQW
QKEYLGAICTCTCLGGQQGWRCSNCHRPGFDPLIEGTSSHSSESSLSQHTLTRYGSRYIH
CPVECRSPGGLLADSEQLE
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atgcaccactccacagtcggggtcttgttgttggccgtgtgtctgaatgcagccagcggc
catgtcggcaaaagtaggaggcagagtccatacgatggaggtacccagaatcagaattat
tgtgtagacaatgggaagatttaccacgtcaaccagcaatgggagcgtacttacatgggc
cgtgtcatgatctgtacctgttatggggcagggcaaggttggaattgtgaatcgaagcct
gacgttgaggagatgtgctatgaccagtacactgggaccaggcaacgtgttggtgatacc
tgggagcggccaaaggatggcatgatttgggactgtacctgcatcggagctggcaggggg
agaatcagctgtaccattgcaaaccgctgccatgagggtggtcagtcctataagatcggt
gatacctggcgaagacctcacgagaccggtggccacatgttggagtgtgtttgccttgga
aacgggaaaggcgaatggacctgcaagccaatagcggagaggtgctatgacaatgtagca
ggttcgacccatgttgttggcgagacctgggaaagaccataccagggctggatgatgatg
gagtgcacgtgtctgggagaaggcagtggacgaatcacctgcagctcaaggaaccgatgc
aatgaccaggatattcaaaagtcctatagaatcggggatacctggacaaagaccgacagc
cggggccatctccttcactgctcctgtaaaggcaaagggcatggagtgtgggaatgtgag
cgacatacctctttggtgtctggtcccgaatccagcagtcacctacagcataatgtgcag
cccgcgatttaccagccacaacctcagtgtgtcagtgatggaggtatttcttacagcgat
ggaatgcaatggcttaagaagcaggggagtgcacgcatgttgtgtacctgtctgggtaat
ggtgtgagctgtcgcgatttgccatctcagacatatggaggtaactcaaacggaaaaccc
tgcatgtttcccttcacgtttatgggcaagacttacacatcctgcacgaatgaaggacgc
agtgatgataaattctggtgcagtacaaccaaagactttgacaccgatcgcagttactcg
ttctgcaaccagcatgctaccacttacattcagagccgaggagggaactccaatggggcg
ctgtgtcacttcccttacctgtacaacatgcggaactataccgagtgcacttccgatgga
agaagagatagcatgaaatggtgtggaacaactgcaaactatgatgccgacaggaagttt
ggcttctgtccaatggcagaaaatgaagagatttgcaccaattcggacggggttatgtat
cacgttggtgatcagtgggacaagatgcatgagcagggttacatgatgaggtgcacctgt
cacggcaatggccgcggtgaatgggcttgcattgcacatgctcagttgcgagatcagtgc
gtggtggacgacattacatacgaagtgggccagaccttctataaacagcatgaagagggt
cacagcatgaactgcacttgctacggccagggccgggggcggtggaggtgtgatgccctt
gatcagtgccaggacacggacacgcaacggttttaccagatcggcgagaacttccgcaag
tacctgaatggaatccagtaccagtgccactgctacggccggggaatcggggaatggtcc
tgtcagccactgacagccttatcaggatctgaacctatcaaagtgatgatcacggaagtt
gggaaccagacggactcacatcccatcctgtggaacaagccggaatcattccatgtcacc
cagtacacactgaaatggaagcctaaaaactcccgggagcgatggagagaggtgaccatt
ccaggcaacatgtactcctataccatccgggatctgaaaccgggcctcacctatgaggga
gagctgattggcagggtgtggaatggccgctcaatgttcaccaactttgagttcacaacc
tcctacatgacacggtctccaaccgagggtgagacaccactgttgcctgaggaagacatc
atcagggagtcctcgacaacagaatccatcaccgagatcacctccagcagctttgtggtc
tcctgggtatctgcctctgacacggtctctgggttccgcatcaagtatgagcttagtgaa
gatcaggcccagcctcagtaccttgatgttccaagcacagccacatctgtttccattcct
aatctgctgcctggccgcaagtacatcgtgaatgttttcgaagtctcagaagatggagag
aagttgatcctaaccaggacccccacgacagctcctgacagtcccactgagtacaccgtc
gatcacgtcgatgagacctccatcaccattgaatggtccaggcctcaagccccgatcaca
ggttaccgtgtggtgtacacgccgtcggtggaaggagccagcactgagatcattctgccc
agcaccgcaacccacctgaccctgactgacctgctgcctggcatccagtacaacatcagt
atctactccgtggaggagagtcaggaaagcgttccgctagtcatccagcagaccaccgat
ggcgtccctcaagcagtggtgttggaaccgccgaccaacctgcagttcaacgatgtgaca
gagaacaagatcactgtcatgtggaccccccctcgcgccgtgatcattggttaccgtgtc
accatgctgccgctagaccgccatgaccgccaaagcaccgaactgcgcccatccaccaac
tctgcccagttcaccagcttactgcccggcaccacctaccgcttctccgtctacgccttg
aacaatgaggttgagagccagcctctggttggacagcagaccaccaagctcgacgctccc
accaacctcaagttccgagacatcaccaagaactcggtgctggtgacctggactccacct
cgggcccggataaccgcttacgtgctgacctgggccctgaccactgacgagaacgtcaag
actatccagctcgagcccaactttaccaggtaccggctgcaccggctgctgccaggatcc
gagtacgttgtcagcctcaccgcgaagcaaggcaacctgacaagccagagagtccacaac
attctgacaactcgggagaccgtaggcccagtgccaaacttcaacacagaggtgacggac
accgctatcatcatcacatggacacccatgcccaggatatcattccgggtgggagtccga
cccagccaaggtggagaaacccctcaggaagtgaccagtaactccgggagcatcatcatc
tccagcctgacacctggtaccgagtacaccatctccatcacagtgatagcagacgaccaa
gtgcaggacaaccccatcaccaagaccgtcgtcactgagttggccccgcccaccgaccta
caggtctaccctgatcctaccactggagatctgatcgtgacttggcgagagggaccatca
acagatatcaccggctaccatgtgacctgcaccccaaaaccaggccaacagggcaacctt
ctggaggagtttgttgaagctggacagacctcgtggatccccgagaacctgactcctggc
attgaatacaatgtcagtgtctatactgtcaaggacaacaagaaaagccagcctgtgtcc
acggtgataacccaagaaatcccccaactcactgacctgaccttcgttgacgtaagtgac
acgagcattggcctgcaatggacaccgctaaactattcggccatcactggctaccgcatc
actgtcatagcggcgggggagtcggttcccattctcgaagactttgtcagctcgtcgacg
ggatactatactgtgcaaggcctggagcccgggatagattacgacatcagtgttatcacc
ctgatagagggtggcactagtgtcaccaccactcgcaagcagcaaactgcggtaccaccc
cccaccaacctgcgcttcacccatgtgggggcagatactatgagaatcagctggtcaccc
cctccctccatcgacctcagcaacttcctggtgcgctacagacccgtaggggatgaagag
gggtcaactgatctgaccatcaccccttcaaacagcatggtggtactgacaggtctccag
cctggcacagaataccgggtgcaggtgtactctgtgatcgacgagagagagagcgctccg
ctgagtggcactcagcgaacaggtatcgattccccgactggcatcgacttctccaacgtg
gcgaccacctccttcaccgtgcactggctgccccccaaagcccacgtcactggctaccga
gtgcggcattacctggagagcggcgccaggccgagggacgagcgggtaccggcctcccgc
acctctctgcagctcaccaacctggtgccgggctcggagtatgtcgtcagcatctacgcc
ttcaacggcaggcaggagagcttgcccttggtcggccaccagtccacaatctcggattct
ccgactgacctggaattcacccgttccacgcctacaagtctgaccatcagctggaaacca
ccacccgtgtttgttaaagtctaccgcatcgcttttggagagtcaggaggccacggacaa
gtgaaagaggtgatcataccggggtctgaatccactgctaccatcgacggcctgcgcccg
ggcactgagtacacggtgaccgtctatgccgtaactggccgtggagacagtccggcgacc
agcaagccagttgtgggctctgagaagacagagattgacacgccgacttcgttgaaggtg
aaggaagtgcatgacaacagtctgaccatcagctggaagcctcctgtcgccccggtgacc
ggttacaaggtcaccagtgtcccgaaggatggcgtcggcccagtgataactcgcagcgtc
ccggcaggtcagactcagctaaccatcgagggcctcatgccaacagtggagtatatggtc
agtgtatacgccctgggaaaacatggagagagtgccccgctcaccgaaacagcagccacc
accatcgaccgacccaaggagctaaccttcacagatgttgacgtggactcgatcggcttg
gcgtgggagagccccgagggtcaggtcacggcctacagagtgatctactccagtcctgag
gatggggtccgtgagctgctgcccagccctaaccccgaggacgataccgccgagctggtc
ggcctgaggcctggcaccgagtacacggtgcaggtgtatgccttgtatgacaaccaagag
agcattcctctgacaggcacccagaccacagccattccacctccgaccaacctggaattt
gttcaagtgactccgacgagcatgaccatcgcctggcacgcgcctgatgctgatgtgacc
cgttaccgggtggtggtgaaacccagggagaaagcagggcctagtaaggagctgactctc
ggcccagataacaccagcgccaccgtttctggactcatggtcgcaaccaagtacaatatc
tttgtgtacgccatcaaggatgccttgaccagccagcctttgcaaggcatcaaagcaaca
ctggatgacgtcggctcgccccggaagatccaagtcagtggggtgacggagaccagcatc
accctgcagtggcgcatcaaggccaggactgtgtctggcttccagatcgatgccgtcccc
accggccagcagagcccagtgcagaggactgtggggcccaaccagcgctcctacaccatc
acaggcctccagcctggcactgagtacagcattaacatctacacactgagtggcgactct
cgcagtcccccctccacagtcatcgctcggactgccatcgactctccatccaacctgcgg
ttcatctccaccaccgccgacagcatcgtgttcacatggcagcagccacgcgcccacatc
accggctacatcgtcacctaccacgccaaggggcggccctcggtggagctccgcccacgg
ccacccgccaactccaacgaagcgatgatcacagggctgcggcctggaactgagtacacc
atcaacatcagagctattcagaattctctgcagagtgagccactgagtgggaagaaagtc
acagggccggatgacaggggccagaggccactggtcgacagagacggcaaggacggccag
cccgatgaccagtcctcgcagccgcggccttcgagaccagtcaggccagaggacgacagg
aagaggaccaccgagggtccccacagccagcgccccatcttccccatccactcacacggg
gtggaggagatggaggtcgatctgcccaatgggcacggcggccaacctgacacccaggcg
cccggccaagagacgcgacagcccaagaccatcgtctcctggcaacccagcaccatcgcc
ttggagtacctggtcacgtgctaccctgtgggacagaaggagaacgctttccagcttcgg
gttccgggcacctccacatacgccgtgctgcccaacctggtgttagggacacgatacaac
atcctggtcgaggctctggatgggcaagggaagcacaaggtcctggaggacatcatcaca
gtcggacatacctctcccgaccacggcacccagctcatccctgatgaatcttgctttgac
acagccacaaactcccactatgccatcggccaggagtgggagcgaatgtctgagactggt
ttcaaactctggtgtaaatgcttaggctatggaagtggtcatatcaggtgtgactcaact
aagtggtgccacgataatggcatgaactacagagtcggtgagaaatggaaccgtcgcagt
gacaacggccaaatgctcagctgtacttgcctgggcaacgggaagggcgagtttaaatgt
gaaccacacgaagcctcttgctacgatgagggaaacatgtacaatgtaggggaacagtgg
cagaaggagtatctgggtgccatctgtacctgtacttgcttaggaggacaacagggttgg
cgttgcagcaactgccacaggcccggtttcgacccgctgatagagggaaccagctcccat
tcgtctgagtcatcattgtcccaacacacgctgacgagatacggatcaagatacatacac
tgcccggtggaatgcaggagcccgggaggtttgctggctgactctgagcagttggagtaa
DBGET
integrated database retrieval system
