Chiloscyllium plagiosum (whitespotted bambooshark): 122551557
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Entry
122551557 CDS
T08871
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
122551557 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122551557 (rapgef4a)
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
122551557 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
DUF1667
Motif
Other DBs
NCBI-GeneID:
122551557
NCBI-ProteinID:
XP_043549552
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All DBs
Position
7:complement(47860706..48151983)
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AA seq
1085 aa
AA seq
DB search
MISLAMVAAHSSSQSSASSEWISCLDKRPAERSSEDVDIIFSWLKGLKAFEKFHPTLLYQ
ICLYGYYENLEKGVTLFRQGDLGTSWYAVLAGSLDVKVSETANHQDAVVLCTLGIGTAFG
ESILDNTPRHATIVTREYSELLRIEQKDFKTLWEKYRQYMAGHLVPPYGVMETTSSNDRI
PEKENVSSSTLCSVSKNKLQQSQDVLSIRSVESFNIEFLTFSEISFGCCSFMPTAVIENR
VPLHPVKTITQVPSEKILRAAKVLRSVILSQAPHMIRDRKYHLKTYKQCCVGTELVDWMI
QQTPCVHSRPQAVGMWQVLLEEGVMNHVDQEHSFQDKYLFYRFRDDEQEGVPPPTDEEKR
ECEEELQETMLLLSQIGPDAHMRMILRKQPGQRTVDDLEIIYEELLHIKALSRLSTTVKR
ELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGTVNVVIYGKGVVCTLQEGDDFGKLAL
VNDAPRAASIVLREDNCQFLRVDKEDFNRILCDVEANTVRLKEHGRDVLVLEKIPMGSRP
SNQGSTQTQYKYTVMAGTPEKILEHFLETIRPDLPANGMTGVPPPWSLTERKGEAFLTDP
CLDDFVLLHCIFMPHSQLYPALMAHYHAEALQGTEQEKLDYALSNKRRVIRLVLHWAKVY
ADLLQEEDSAVAFLEEFFVSVSDDSRMIPALKEQLPELEKLVKQNSEEGNGKASQKKHKV
ILRQFSIGEDRLQKRQPIRSTDEILFKIYCIDHTYTTIRVLVAASVTEVISAVKDKLGST
EDLILVQMSSAGEKVVLKPNEVSVFTMSNVNGRLFVCPREKFDCLTPLPEQEGPSTGTMA
TFELMSSKDLAYQITIYDWELFNCVYELELIYHTFGRHHFKKTTANLDLFLRRFNEIQFW
VVTEICLCSQLSKRVQLLKKFIKIAAHCKEYRNLNSFFALVMGLSNVAVSRLSQTWEKLP
SKFKKIYSEFESLMDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDMTFTHEGNNTLRDSLI
NFEKMHMIGNSVRTARHCRSQPFNPDSSLANKNHQDVRVYVRQLNVIDNQRTLSQLSHKL
EPRRS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgatctccctggccatggtcgctgctcatagctcgtcccaatcctcagcatcatcagaa
tggatctcttgcctggataaaagacctgcggaacgttctagtgaagatgttgacattata
ttcagctggctcaaaggactgaaggcatttgagaaattccatcccaccctcttgtaccag
atctgcttgtatgggtactatgaaaatttggagaaaggtgtcacgttgtttcgacaagga
gatcttgggacaagttggtatgcagtactcgctggatccctggatgttaaggtgtcagaa
acagccaatcaccaggatgctgttgtactgtgcactctcggaattggaacagcatttgga
gaatcaattctggacaatactcctcgccatgcaacaattgttaccagggagtacagcgag
cttctccgcattgaacagaaagacttcaaaacactttgggagaaatatcgacagtacatg
gcagggcatttggtccctccctatggtgttatggaaactacttctagtaatgaccgaatc
cctgaaaaggagaatgtgagcagcagtacactgtgttctgtgtcaaaaaacaagctgcag
cagtcacaagatgttttgagtatcagaagtgttgaaagcttcaatatagaattcctgact
ttttctgaaatctcttttggatgttgttccttcatgcctacagcagttattgaaaatcgt
gtccctctacatccagttaaaaccattactcaggttccatctgaaaaaatccttagagct
gcaaaggttttacgaagtgtgatactatctcaagcacctcacatgattagagatcggaaa
taccacctgaagacctacaagcagtgctgtgttggcacagaattagtggactggatgatt
cagcagacaccttgtgttcattcccgcccacaagctgtaggcatgtggcaggtgctgctt
gaggaaggagtcatgaaccacgtggaccaagagcacagtttccaggacaagtacctgttt
tatcggttccgggatgatgaacaggagggtgtccctccacccacagatgaggagaaaaga
gagtgtgaggaggagctacaagaaaccatgcttctcctttctcagattgggccagatgca
cacatgagaatgattttacgcaaacagccaggccagagaactgttgatgatttagaaatc
atatatgaagaattgttacacattaaagccttgtctcgactctctaccacagtaaagcga
gagcttgctggtgttttgatatttgaatctcatgccaaagcagggacagtgttgtttaat
caaggagaagagggcacttcatggtatattatcctcaagggcacagtgaatgttgttatc
tatggcaagggagtagtctgtacattacaggaaggagatgattttggaaagttggctttg
gtgaatgatgctccaagagcagcctccatagtacttcgtgaggataattgccagtttcta
cgtgtagataaagaagattttaacagaatcctttgcgatgttgaggccaatacagtgaga
ctcaaagaacatggacgagacgttttggttttggagaaaataccaatgggtagcagacct
tctaatcagggaagcacacagacacaatacaaatacacagtgatggcaggaactcctgaa
aaaatattagagcactttctggaaactatacgccctgatttgcctgctaatggaatgaca
ggtgtccctccaccatggtccctgactgagaggaagggtgaggcttttttgacagatcca
tgccttgatgactttgttctgttgcactgcatttttatgccacacagccagctttaccca
gccctaatggctcattaccatgcagaagcattgcaaggtacagaacaagagaagctggac
tatgccctcagtaacaagagacgggtcatccgccttgtcctacactgggcaaaggtatat
gcagatctcttacaggaagaagacagtgctgttgcatttcttgaagaattttttgtgtca
gtgtcagatgactcacggatgattcctgctttgaaggaacagctcccagaattagagaaa
ctggtaaaacagaactccgaagaaggaaatggcaaggcatcacaaaaaaagcacaaagtt
attttgcgtcaattcagcattggtgaggatagactccaaaagagacaaccaatacgaagt
acagatgaaattctctttaagatttactgcattgatcatacgtacaccacgatccgtgtg
cttgtggcagcctccgtaacagaagtcatcagtgctgtgaaagacaagctcggatcaaca
gaagacctaattcttgtgcaaatgagctcagctggagaaaaagtggtgctgaagccaaat
gaagtttcggtttttacaatgtcaaatgtgaatgggcgtttgtttgtctgtccgagggaa
aaatttgattgtctgacaccactgccagaacaggagggcccatccactggaactatggca
acttttgagttaatgagttctaaagatctagcctatcagattacgatttatgactgggag
ttgttcaactgtgtatatgagctggaattgatttatcacacatttggaagacatcatttc
aagaaaaccactgccaatctcgatctatttcttcgaagattcaatgaaattcagttctgg
gttgtaacagaaatctgcctatgttctcagctcagcaaaagagtacaacttctgaagaag
tttatcaagattgcagctcattgcaaagagtatagaaatttgaactccttttttgcgctg
gtaatgggactgagcaatgtagctgttagccgtctctctcagacctgggagaaacttccc
agtaaattcaagaaaatctattcagaatttgaaagcttaatggatccttccaggaaccat
agggcatacagacttacagtagccaaactggagccaccaatcattcccttcatgccttta
cttataaaagacatgacatttacccatgaaggcaacaatacactcagggatagccttatc
aattttgaaaaaatgcatatgattggcaactcagtaaggacagccagacactgcagaagt
cagcccttcaatccagattcatcacttgcaaacaagaaccatcaggatgtccgtgtatat
gttcgacagcttaatgtaattgacaatcagagaactttatcacagttgtctcacaagttg
gaaccacggcgatcctaa
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