Chiloscyllium plagiosum (whitespotted bambooshark): 122558841
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Entry
122558841 CDS
T08871
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122558841 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122558841 (usp4)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122558841 (usp4)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122558841 (usp4)
Ubiquitin system [BR:
cpla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122558841 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
DACNK
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
122558841
NCBI-ProteinID:
XP_043563605
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All DBs
Position
18:10899018..10999734
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AA seq
976 aa
AA seq
DB search
MAEGGVPDLESQKNEIGNLLNTSLKKGDSWFLIDSRWFKQWKKYVGFDSWDMYNVGEHGM
FPGPIDNSGLFADIETQALKEHLIDELDYVLVPTEAWNKLVSWYGCVVGQEPIVRKVVEH
GMFVKHCKVEVYLLELKLCENNNMDNVVTRHFSKADTIDTIEKEMRKLFNISAEKETRLW
NRYMTNTYEQLNKPDSTVQDAGLYQGQVLVIEQKNADGTWPRQTSQAKSSTATSRNLSTS
PKSSTSCNSYSSLSSPSTVSNGESSNSSNSSYILNSSSSTRGSSGYGSSHNSSYYYRESH
APSQAGLCGLSNLGNTCFMNSALQCLSNTGPLTDYFLQGKYEEELNRENPLGMRGEIAEA
YAELIKQMWSGRSSYVAPRMFKTQVGCFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKK
KPYLELKDANGREDEVVAKEAWENHRLRNNSIIVDIFHGLFKSTLVCPECSKISVTFDPF
CYLTLPLPMKKDRTMEIFLVQADSSRPMQYRIIVPKMGAICDLCTALSQISGVAAEKMVV
ADVYNHRFHKTYRQDEALNHIMDRDDIFVYEVPGVREEDSENSKCISLPIYFRERRMRSS
SAPVGTVLFGQPLLVSVPRDNVTVDNLYELVLARISRYVKVCKETYENYSSGSLSIDNGL
SSEPNGINDEGEEEMDLQTAVGDNEEISSEPENSQSDGSAADENDKMENGPTKRTTKGNK
QKCKKKLFSFSMVNAYGTSDFSSIAEDGTYLKLNSHSTIAIDWDPEIKKMYYDDQEAEAY
EKHESMSQPQKKRSSVALRECIDLFTTMETLGEHDLWYCPTCKKHQQATKKFDLWSLPKI
LVVHLKRFSYNRYWRDKLDTLVEFPIRDLNMSEFVYNPKAGPCIYDLVAVTNHYGGMGGG
HYTAYAKNKIDGQWYYFDDSSVSGASEDQIVTKAAYVLFYQRRDSNNHHNSSPASLSSPE
ENGGTGTEVSKPQVRY
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggtggcgtcccggatctggagagccagaagaacgagatcgggaacttgttg
aatacctccctcaagaaaggggattcgtggttcctaatagacagtaggtggtttaaacaa
tggaaaaaatatgtgggtttcgacagctgggacatgtacaacgtgggagaacatggaatg
tttccaggccccattgataattctgggctctttgcagatatagaaacacaggccctgaaa
gaacacttgattgatgagttggattatgtcttggttcccactgaagcttggaacaagttg
gtcagttggtatggttgcgttgtaggtcaggaacccattgtacgaaaggtggttgagcat
gggatgtttgtaaaacactgtaaagtagaggtttacctcttagaattgaaattgtgtgag
aacaacaacatggacaatgtggtgacacgccatttcagcaaagcagataccatagataca
atagaaaaggagatgcgaaagctgttcaatatttcagcagaaaaggagacaaggttgtgg
aatagatacatgacaaatacttatgagcagcttaacaaaccagatagcactgtacaagat
gctggtttgtatcagggacaggttttggtaatagaacagaagaatgctgatggaacttgg
ccaagacagacatctcaagcaaaatccagcactgccaccagcagaaatttatctacctct
ccaaaatcctcgactagctgcaactcctactcgtccttgtcctccccttctacagtctct
aatggtgagagcagcaactccagcaactccagctacatattaaacagctccagctccacc
agggggtcaagtggttatgggtcttcacacaacagttcttattattatagggaatctcat
gcaccaagtcaagcaggactttgtggcctaagtaatcttggtaatacctgcttcatgaat
tccgcgttgcagtgtttgagtaatactggtccattgactgattatttcctacaaggaaag
tacgaagaagaactaaatcgggaaaatcctttaggaatgaggggagaaattgctgaagcc
tatgccgaattgatcaaacagatgtggtcagggagaagctcttatgtggcacctcggatg
tttaaaacccaggttgggtgttttgctccccagttttcaggataccaacaacaggattct
caagagctacttgcatttcttttagatggcttacatgaagatttaaatcgtgtgaagaaa
aaaccctacttagaacttaaagatgctaatgggagggaagatgaggtggtggcgaaagaa
gcatgggaaaatcacaggttaagaaacaactccatcattgtggacatcttccacggactt
tttaaatccactctagtttgtcctgaatgttcaaaaatttctgtaacatttgaccctttc
tgttacttaactcttcctttgcctatgaagaaggaccgcacgatggaaatctttcttgtg
caggcagactcatctaggccaatgcagtacagaataattgttccaaagatgggtgcaatt
tgtgacctgtgtacagccctctctcaaatctcaggcgttgctgcagaaaagatggtggtt
gctgatgtttataatcaccggttccacaaaacatatcgacaagatgaagctttaaaccac
attatggacagggatgatatttttgtttatgaggttccaggtgtgagagaggaagactct
gaaaattcaaaatgcatcagcctcccaatttatttccgtgagagaaggatgcgatcctca
agtgcacctgttggcaccgttctctttggtcaacctctcttagtctctgttcccagagat
aatgttacagtggacaacctgtatgaactagtccttgcgcgaatttcccgttacgtgaaa
gtgtgcaaggaaacgtatgaaaactatagctctggatctctgagtattgacaatggcctg
tctagtgagccaaatggtattaatgatgaaggtgaggaggagatggatctgcaaactgca
gtgggagataatgaggaaattagttctgaacctgaaaacagccagtctgatggctctgca
gctgatgagaatgataagatggaaaatgggccgaccaagcgcaccaccaaaggaaataaa
cagaagtgtaaaaagaagctattcagcttcagcatggtgaatgcctatggcacctcagat
ttcagctccattgcagaagatgggacatacctcaagttaaactcacattccacaattgct
atagactgggatcctgaaatcaaaaagatgtattatgatgatcaagaagctgaggcatat
gaaaagcatgaatccatgtcacagcctcaaaagaaaagaagttcagttgcattaagagag
tgtatagacttgtttacaacaatggagactttgggagagcatgatctttggtactgcccc
acctgtaaaaagcaccaacaggccactaaaaagtttgatttgtggtcactaccaaagatc
ctcgttgtacatctgaagcgtttctcatataataggtactggagagataaacttgacact
ctagtagagtttcctataagggatttgaacatgtctgagtttgtctacaatcccaaagct
ggtccttgcatctatgacctggttgcagtcactaaccactatggaggaatgggaggaggc
cattatactgcatatgctaaaaataaaattgatggacagtggtattactttgatgacagt
agtgtatcaggtgcatctgaagatcagattgtgacaaaagcagcttatgttcttttctac
cagcgtagagactccaataaccatcacaacagttcacctgcttccttgagttctcctgaa
gagaatggcggcacaggaacagaggtttccaaaccccaggtgcgatactga
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